C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005M8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187258-ENSG00000173852 CGP 9606 7:34658239-35038271
GeneTranscriptPositionBiotype
ENSG00000173852 (DPY19L1)
dpy-19-like 1 (C. elegans) 		ENST00000310974 (DPY19L1-001) 34928876-35038041 protein_coding
ENST00000428054 (DPY19L1-008) 34931568-34939368 protein_coding
ENST00000446375 (DPY19L1-005) 34945683-34973605 protein_coding
ENST00000462134 (DPY19L1-004) 34955329-34988234 processed_transcript
ENST00000463538 (DPY19L1-003) 34973513-35000702 processed_transcript
ENST00000481923 (DPY19L1-002) 35010468-35038271 processed_transcript
ENST00000493989 (DPY19L1-006) 34954546-34955367 retained_intron
ENST00000612226 (DPY19L1-201) 34931400-34939237 protein_coding
ENSG00000197085 (NPSR1-AS1)
NPSR1 antisense RNA 1 		ENST00000358772 (NPSR1-AS1-004) 34568252-34758272 antisense
ENST00000419766 (NPSR1-AS1-008) 34346512-34758234 antisense
ENST00000428922 (NPSR1-AS1-007) 34703850-34761191 retained_intron
ENST00000431669 (NPSR1-AS1-006) 34643227-34871582 antisense
ENST00000436945 (NPSR1-AS1-003) 34718862-34834328 antisense
ENST00000439852 (NPSR1-AS1-005) 34566723-34758272 antisense
ENST00000539747 (NPSR1-AS1-001) 34350422-34761191 antisense
ENSG00000230356 (NCAPD2P1)
non-SMC condensin I complex, subunit D2 pseudogene 1 		ENST00000432906 (NCAPD2P1-001) 34750253-34752053 processed_pseudogene
ENSG00000235379 (RPL7P31)
ribosomal protein L7 pseudogene 31 		ENST00000450192 (RPL7P31-001) 34710757-34711480 processed_pseudogene
ENSG00000242653 (RN7SL132P)
RNA, 7SL, cytoplasmic 132, pseudogene 		ENST00000478131 (RN7SL132P-201) 34753424-34753719 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005M8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043659-ENSMUSG00000043067 CGP 10090 9:24097996-24503140
GeneTranscriptPositionBiotype
ENSMUSG00000043067 (Dpy19l1)
dpy-19-like 1 (C. elegans) 		ENSMUST00000115277 (Dpy19l1-001) 24411776-24487914 protein_coding
ENSMUST00000129048 (Dpy19l1-005) 24481977-24497172 processed_transcript
ENSMUST00000142064 (Dpy19l1-002) 24411778-24503140 protein_coding
ENSMUST00000149001 (Dpy19l1-004) 24422289-24426418 retained_intron
ENSMUST00000152480 (Dpy19l1-003) 24412051-24423959 retained_intron
ENSMUST00000170356 (Dpy19l1-201) 24411803-24503140 protein_coding
ENSMUSG00000043659 (Npsr1)
neuropeptide S receptor 1 		ENSMUST00000059650 (Npsr1-001) 24098018-24316398 protein_coding
ENSMUST00000133787 (Npsr1-002) 24097996-24289892 protein_coding
ENSMUST00000154337 (Npsr1-004) 24300334-24314871 processed_transcript
ENSMUST00000154644 (Npsr1-003) 24283433-24313343 protein_coding
ENSMUSG00000074465 (Gm10701)
predicted gene 10701 		ENSMUST00000098926 (Gm10701-001) 24341657-24418709 antisense
ENSMUSG00000085969 (Gm15600)
predicted gene 15600 		ENSMUST00000153522 (Gm15600-001) 24296139-24300257 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005M8_0001ENSG00000173852ENST00000310974ENST00000428054ENST00000446375ENST00000462134ENST00000463538ENST00000481923ENST00000493989ENST00000612226ENSG00000197085ENST00000358772ENST00000419766ENST00000428922ENST00000431669ENST00000436945ENST00000439852ENST00000539747ENSG00000230356ENST00000432906ENSG00000235379ENST00000450192ENSG00000242653ENST00000478131CIL_0005M8_0002ENSMUSG00000043067ENSMUST00000115277ENSMUST00000129048ENSMUST00000142064ENSMUST00000149001ENSMUST00000152480ENSMUST00000170356ENSMUSG00000043659ENSMUST00000059650ENSMUST00000133787ENSMUST00000154337ENSMUST00000154644ENSMUSG00000074465ENSMUST00000098926ENSMUSG00000085969ENSMUST00000153522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005M8_0001ENSG00000173852ENST00000310974ENST00000612226ENSG00000197085ENST00000358772ENST00000419766ENST00000431669ENST00000436945ENST00000539747ENSG00000230356ENST00000432906ENSG00000235379ENST00000450192ENSG00000242653ENST00000478131CIL_0005M8_0002ENSMUSG00000043067ENSMUST00000115277ENSMUST00000142064ENSMUST00000152480ENSMUST00000170356ENSMUSG00000043659ENSMUST00000059650ENSMUST00000133787ENSMUST00000154337ENSMUST00000154644ENSMUSG00000074465ENSMUST00000098926ENSMUSG00000085969ENSMUST00000153522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173852 ENST00000310974 2.299±0.00 2.310±0.00 N/A 5.968±0.00 1.333±0.00 1.849±0.00 2.832±0.76 1.468±0.00 1.555±0.00 2.450±0.00 0.289±0.19 1.361±0.81 5.928±3.44 10.060±3.99
ENST00000428054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.181±0.00 N/A N/A N/A
ENSG00000197085 ENST00000358772 N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419766 0.011±0.00 N/A N/A 0.011±0.00 0.015±0.00 0.013±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.005±0.00
ENST00000428922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431669 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.04
ENST00000439852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539747 N/A N/A 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230356 ENST00000432906 0.009±0.00 N/A N/A N/A N/A 0.091±0.00 N/A 0.069±0.00 N/A N/A N/A 0.022±0.00 0.093±0.07 0.021±0.00
ENSG00000235379 ENST00000450192 N/A N/A 0.233±0.00 N/A 0.031±0.00 N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A
ENSG00000242653 ENST00000478131 N/A 0.412±0.00 N/A 0.064±0.00 N/A N/A 0.055±0.00 0.477±0.00 0.212±0.00 N/A N/A 0.268±0.00 N/A 0.161±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043067 ENSMUST00000115277 N/A 11.738±0.00 N/A N/A N/A 1.563±0.00 N/A N/A 3.361±0.28 1.712±0.00 N/A 5.855±2.02 N/A N/A
ENSMUST00000129048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142064 3.209±0.48 9.827±0.00 5.241±0.09 11.590±4.11 4.728±1.97 N/A 1.138±0.15 1.449±0.17 6.134±2.19 2.130±0.49 0.481±0.06 6.920±2.90 3.477±1.05 5.422±1.71
ENSMUST00000149001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152480 N/A N/A N/A 3.425±0.70 N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A N/A N/A
ENSMUST00000170356 6.273±1.44 N/A 3.080±0.37 3.981±0.19 5.066±0.45 N/A 1.358±0.17 1.656±0.09 5.178±2.95 3.033±0.88 0.417±0.11 5.991±1.18 4.832±4.27 2.678±0.63
ENSMUSG00000043659 ENSMUST00000059650 N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.001±0.00 N/A
ENSMUST00000133787 N/A N/A N/A 0.012±0.00 N/A N/A N/A 0.063±0.00 0.017±0.00 N/A N/A N/A N/A N/A
ENSMUST00000154337 N/A N/A N/A 0.117±0.12 0.084±0.00 N/A N/A 0.032±0.01 0.023±0.01 N/A N/A 0.154±0.00 0.020±0.00 0.021±0.00
ENSMUST00000154644 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A 0.062±0.00
ENSMUSG00000074465 ENSMUST00000098926 0.046±0.01 0.179±0.10 0.032±0.01 0.029±0.00 0.064±0.01 0.097±0.00 N/A 0.040±0.00 0.091±0.01 0.063±0.01 0.063±0.00 0.160±0.07 0.034±0.00 0.151±0.10
ENSMUSG00000085969 ENSMUST00000153522 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.01 N/A N/A N/A N/A N/A

Loading