C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuropeptide S receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059650 Npsr1-001 ENSMUSG00000043659 10090 + 9:24098018-24316398 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverPlacentaENSMUST00000059650
Transcript ID Brain Liver Placenta
ENSMUST00000059650 0.007±0.00 0.008±0.00 0.001±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FG CIL_0003FG_0002 CGP 9:23223076-24316398
CIL_0005M8 CIL_0005M8_0002 CGP 9:24097996-24503140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005000 IEA vasopressin receptor activity
GO:0005886 IEA plasma membrane
GO:0007218 IEA neuropeptide signaling pathway
GO:0008188 IEA neuropeptide receptor activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359791 NPSR1-002 protein_coding Homo_sapiens 0 1177
ENST00000360581 NPSR1-001 protein_coding Homo_sapiens 0 1299
ENST00000381539 NPSR1-007 protein_coding Homo_sapiens 0 1151
ENST00000381544 NPSR1-005 nonsense_mediated_decay Homo_sapiens 0 922
ENST00000381553 NPSR1-006 protein_coding Homo_sapiens 0.00000000004 73
ENST00000531252 NPSR1-009 protein_coding Homo_sapiens 0 889

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