C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019728-ENSDARG00000076135 CGP 7955 13:22696003-22786346
GeneTranscriptPositionBiotype
ENSDARG00000019728 (bmpr1aa)
bone morphogenetic protein receptor, type 1aa 		ENSDART00000026768 (bmpr1aa-001) 22696003-22760002 protein_coding
ENSDART00000123383 (bmpr1aa-003) 22753073-22754353 retained_intron
ENSDART00000133617 (bmpr1aa-002) 22696150-22742778 processed_transcript
ENSDARG00000092065 (si:ch211-134m17.6)
si:ch211-134m17.6 		ENSDART00000140692 (si:ch211-134m17.6-001) 22712155-22722692 processed_transcript
CIL_0005OA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107779-ENSG00000173269 CGP 9606 10:86756650-86969481
GeneTranscriptPositionBiotype
ENSG00000107779 (BMPR1A)
bone morphogenetic protein receptor, type IA 		ENST00000372037 (BMPR1A-001) 86756650-86932838 protein_coding
ENST00000480152 (BMPR1A-003) 86838939-86890117 protein_coding
ENSG00000148671 (ADIRF)
adipogenesis regulatory factor 		ENST00000372013 (ADIRF-001) 86968192-86970915 protein_coding
ENST00000416348 (ADIRF-002) 86968432-86970530 protein_coding
ENST00000561504 (ADIRF-003) 86968490-86983934 nonsense_mediated_decay
ENSG00000173267 (SNCG)
synuclein, gamma (breast cancer-specific protein 1) 		ENST00000348795 (SNCG-001) 86958630-86963165 protein_coding
ENST00000372017 (SNCG-002) 86958656-86963260 protein_coding
ENST00000465679 (SNCG-004) 86958618-86962873 processed_transcript
ENST00000483064 (SNCG-003) 86959375-86963258 processed_transcript
ENSG00000173269 (MMRN2)
multimerin 2 		ENST00000372027 (MMRN2-001) 86935540-86957863 protein_coding
ENST00000474994 (MMRN2-002) 86944364-86969481 protein_coding
ENST00000488950 (MMRN2-003) 86943871-86944571 processed_transcript
ENST00000608090 (MMRN2-010) 86945222-86957571 nonsense_mediated_decay
ENST00000608753 (MMRN2-009) 86945481-86957585 retained_intron
ENST00000609457 (MMRN2-008) 86943872-86969312 protein_coding
ENST00000610081 (MMRN2-011) 86943821-86954258 protein_coding
ENSG00000200176 (RNU1-19P)
RNA, U1 small nuclear 19, pseudogene 		ENST00000363306 (RNU1-19P-201) 86889569-86889733 snRNA
ENSG00000270874 (RP11-420K10.1)
 ENST00000603626 (RP11-420K10.1-001) 86854696-86856236 processed_pseudogene
ENSG00000272734 (ADIRF-AS1)
ADIRF antisense RNA 1 		ENST00000418273 (ADIRF-AS1-002) 86965740-86971311 antisense
ENST00000440490 (ADIRF-AS1-003) 86965739-86969178 antisense
ENST00000609111 (ADIRF-AS1-001) 86965741-86971311 antisense
ENST00000609170 (ADIRF-AS1-004) 86965345-86967549 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OA_0001ENSDARG00000019728ENSDART00000026768ENSDART00000123383ENSDART00000133617ENSDARG00000092065ENSDART00000140692CIL_0005OA_0002ENSG00000107779ENST00000372037ENST00000480152ENSG00000148671ENST00000372013ENST00000416348ENST00000561504ENSG00000173267ENST00000348795ENST00000372017ENST00000465679ENST00000483064ENSG00000173269ENST00000372027ENST00000474994ENST00000488950ENST00000608090ENST00000608753ENST00000609457ENST00000610081ENSG00000200176ENST00000363306ENSG00000270874ENST00000603626ENSG00000272734ENST00000418273ENST00000440490ENST00000609111ENST00000609170
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OA_0001ENSDARG00000019728ENSDART00000026768ENSDARG00000092065ENSDART00000140692CIL_0005OA_0002ENSG00000107779ENST00000372037ENSG00000148671ENST00000372013ENST00000561504ENSG00000173267ENST00000348795ENST00000372017ENST00000465679ENST00000483064ENSG00000173269ENST00000372027ENSG00000200176ENST00000363306ENSG00000270874ENST00000603626ENSG00000272734ENST00000418273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019728 ENSDART00000026768 N/A N/A N/A 2.358±0.36 N/A N/A 21.988±15.78 12.627±5.93 0.833±0.00 N/A 1.957±0.00 N/A N/A N/A
ENSDART00000123383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092065 ENSDART00000140692 N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107779 ENST00000372037 2.296±0.00 1.514±0.00 1.160±0.00 1.395±0.70 3.008±0.16 2.877±1.42 1.879±0.19 1.407±0.88 0.422±0.00 2.419±0.35 1.352±0.39 1.764±1.00 0.855±0.40 3.133±0.96
ENST00000480152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148671 ENST00000372013 N/A N/A N/A N/A N/A 9.241±0.00 N/A N/A N/A N/A N/A 35.858±10.35 N/A 28.782±0.00
ENST00000416348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561504 229.723±0.00 81.026±0.00 6.448±0.00 12.850±8.62 209.443±194.65 75.497±0.00 27.674±0.00 35.815±32.48 15.660±2.41 203.575±0.00 33.985±0.00 154.964±82.71 N/A 65.973±0.00
ENSG00000173267 ENST00000348795 16.173±0.00 34.251±0.00 N/A 26.960±0.00 124.347±0.00 7.959±7.67 4.641±0.00 3.732±0.00 0.570±0.00 18.319±0.00 3.587±0.00 0.354±0.00 0.863±0.00 8.674±0.00
ENST00000372017 42.636±0.00 67.085±0.00 N/A 52.458±37.30 133.464±132.75 51.318±0.00 1.914±1.48 5.127±0.00 4.090±3.44 2.250±2.14 3.346±0.74 27.156±17.69 10.427±6.35 18.922±15.86
ENST00000465679 N/A N/A 0.399±0.00 N/A N/A N/A 0.626±0.00 1.407±0.00 N/A 0.403±0.00 2.145±0.00 1.015±0.20 N/A 0.922±0.00
ENST00000483064 N/A N/A N/A N/A 2.209±0.00 0.578±0.00 N/A 0.078±0.00 2.428±0.00 N/A N/A 1.657±0.00 2.991±1.29 N/A
ENSG00000173269 ENST00000372027 35.838±0.00 29.869±0.00 N/A 1.604±1.26 9.846±7.37 29.763±0.00 2.577±1.22 3.136±2.46 3.191±1.22 15.643±7.64 3.717±0.91 6.347±4.33 52.228±16.20 4.899±1.52
ENST00000474994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200176 ENST00000363306 N/A N/A N/A N/A N/A 0.640±0.39 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270874 ENST00000603626 0.025±0.00 0.025±0.00 N/A N/A 0.071±0.03 N/A 0.047±0.04 0.016±0.00 N/A N/A N/A 0.023±0.01 N/A 0.034±0.00
ENSG00000272734 ENST00000418273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.719±0.00
ENST00000440490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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