C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synuclein, gamma (breast cancer-specific protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372017 SNCG-002 ENSG00000173267 9606 + 10:86958656-86963260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372017
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372017 42.636±0.00 67.085±0.00 52.458±37.30 133.464±132.75 51.318±0.00 1.914±1.48 5.127±0.00 4.090±3.44 2.250±2.14 3.346±0.74 27.156±17.69 10.427±6.35 18.922±15.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OA CIL_0005OA_0002 CGP 10:86756650-86969481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002118 IEA aggressive behavior
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007268 IEA synaptic transmission
GO:0008344 IEA adult locomotory behavior
GO:0009306 IEA protein secretion
GO:0014059 IEA regulation of dopamine secretion
GO:0030424 IEA axon
GO:0042220 IEA response to cocaine
GO:0042493 IEA response to drug
GO:0043014 IEA alpha-tubulin binding
GO:0043025 IEA neuronal cell body
GO:0043679 IEA axon terminus
GO:0046928 IEA regulation of neurotransmitter secretion
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048487 IEA beta-tubulin binding
GO:0050808 IEA synapse organization
GO:0070062 IDA extracellular vesicular exosome
GO:0071464 IEA cellular response to hydrostatic pressure

Homologs

No Homologs available.

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