C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005QK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185437-ENSG00000183778 CGP 9606 21:39445855-39673137
GeneTranscriptPositionBiotype
ENSG00000184809 (C21orf88)
B3GALT5 antisense RNA 1 		ENST00000329618 (C21orf88-002) 39605599-39612821 antisense
ENST00000380604 (C21orf88-004) 39605599-39612441 antisense
ENST00000380612 (C21orf88-001) 39597147-39612441 antisense
ENST00000489821 (C21orf88-003) 39597147-39599656 antisense
ENSG00000185437 (SH3BGR)
SH3 domain binding glutamate-rich protein 		ENST00000333634 (SH3BGR-001) 39451830-39515506 protein_coding
ENST00000380631 (SH3BGR-006) 39445942-39515207 protein_coding
ENST00000380634 (SH3BGR-007) 39445865-39515355 protein_coding
ENST00000380637 (SH3BGR-002) 39445855-39515506 protein_coding
ENST00000423596 (SH3BGR-010) 39462534-39511775 protein_coding
ENST00000440288 (SH3BGR-005) 39445931-39511706 protein_coding
ENST00000447939 (SH3BGR-009) 39499823-39515506 protein_coding
ENST00000452550 (SH3BGR-008) 39452123-39515506 protein_coding
ENST00000458295 (SH3BGR-004) 39445875-39515270 protein_coding
ENSG00000225330 (AF064860.5)
 ENST00000416555 (AF064860.5-001) 39630271-39726085 sense_overlapping
ENSG00000228349 (RPS26P4)
ribosomal protein S26 pseudogene 4 		ENST00000431743 (RPS26P4-001) 39491544-39491898 processed_pseudogene
ENSG00000235012 (AF121897.4)
 ENST00000411867 (AF121897.4-001) 39525583-39529855 processed_pseudogene
ENSG00000235808 (MYL6P2)
myosin, light chain 6 pseudogene 2 		ENST00000450079 (MYL6P2-001) 39488327-39488760 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005QK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040666-ENSMUSG00000074892 CGP 10090 16:96200470-96319859
GeneTranscriptPositionBiotype
ENSMUSG00000040666 (Sh3bgr)
SH3-binding domain glutamic acid-rich protein 		ENSMUST00000048770 (Sh3bgr-001) 96200470-96228933 protein_coding
ENSMUST00000123728 (Sh3bgr-201) 96200671-96228928 protein_coding
ENSMUST00000129904 (Sh3bgr-002) 96205719-96220591 protein_coding
ENSMUST00000132424 (Sh3bgr-005) 96200729-96224591 protein_coding
ENSMUST00000145069 (Sh3bgr-006) 96220499-96228925 protein_coding
ENSMUST00000157060 (Sh3bgr-003) 96206643-96224563 protein_coding
ENSMUST00000166952 (Sh3bgr-004) 96200704-96220591 protein_coding
ENSMUST00000171181 (Sh3bgr-202) 96200671-96224560 protein_coding
ENSMUSG00000074892 (B3galt5)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 		ENSMUST00000099497 (B3galt5-002) 96280798-96319857 protein_coding
ENSMUST00000113800 (B3galt5-001) 96235801-96319859 protein_coding
ENSMUST00000134058 (B3galt5-004) 96273611-96313775 processed_transcript
ENSMUST00000153586 (B3galt5-003) 96273474-96313774 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QK_0001ENSG00000184809ENST00000329618ENST00000380604ENST00000380612ENST00000489821ENSG00000185437ENST00000333634ENST00000380631ENST00000380634ENST00000380637ENST00000423596ENST00000440288ENST00000447939ENST00000452550ENST00000458295ENSG00000225330ENST00000416555ENSG00000228349ENST00000431743ENSG00000235012ENST00000411867ENSG00000235808ENST00000450079CIL_0005QK_0002ENSMUSG00000040666ENSMUST00000048770ENSMUST00000123728ENSMUST00000129904ENSMUST00000132424ENSMUST00000145069ENSMUST00000157060ENSMUST00000166952ENSMUST00000171181ENSMUSG00000074892ENSMUST00000099497ENSMUST00000113800ENSMUST00000134058ENSMUST00000153586
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QK_0001ENSG00000184809ENST00000329618ENST00000380604ENST00000380612ENST00000489821ENSG00000185437ENST00000333634ENST00000380631ENST00000380634ENST00000380637ENST00000423596ENST00000440288ENST00000447939ENST00000452550ENST00000458295ENSG00000225330ENST00000416555ENSG00000228349ENST00000431743ENSG00000235012ENST00000411867ENSG00000235808ENST00000450079CIL_0005QK_0002ENSMUSG00000040666ENSMUST00000048770ENSMUST00000123728ENSMUST00000129904ENSMUST00000145069ENSMUST00000157060ENSMUST00000166952ENSMUST00000171181ENSMUSG00000074892ENSMUST00000099497ENSMUST00000113800ENSMUST00000134058ENSMUST00000153586
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184809 ENST00000329618 N/A N/A N/A 0.357±0.24 0.338±0.04 0.886±0.00 N/A 0.060±0.00 N/A N/A N/A 0.119±0.05 0.086±0.04 0.083±0.00
ENST00000380604 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A 0.242±0.07 0.111±0.00 N/A
ENST00000380612 N/A 0.117±0.00 N/A 0.106±0.05 0.210±0.00 N/A 0.078±0.00 0.119±0.00 N/A N/A N/A 0.185±0.00 N/A 0.062±0.02
ENST00000489821 N/A N/A N/A 0.186±0.00 N/A 0.157±0.00 0.198±0.00 N/A 0.040±0.00 N/A N/A 0.127±0.00 0.109±0.00 0.059±0.00
ENSG00000185437 ENST00000333634 N/A 0.375±0.00 N/A 1.589±1.37 4.058±0.00 5.345±4.53 10.597±6.84 1.216±0.00 1.864±1.73 0.336±0.21 18.350±4.40 0.835±0.42 0.603±0.19 2.699±0.00
ENST00000380631 N/A N/A 0.296±0.00 1.964±1.66 N/A 0.266±0.00 8.000±0.00 N/A 0.494±0.00 N/A N/A 0.841±0.38 0.343±0.00 1.451±0.00
ENST00000380634 0.275±0.00 1.385±0.00 N/A 3.234±2.74 6.666±0.00 12.580±0.00 10.874±0.00 1.658±0.56 0.340±0.00 1.740±0.00 36.522±0.00 N/A 0.369±0.11 3.051±1.43
ENST00000380637 N/A N/A N/A 2.418±2.12 0.296±0.00 N/A N/A N/A N/A 0.773±0.00 N/A 0.651±0.46 N/A 2.461±0.22
ENST00000423596 1.078±0.00 4.461±0.00 N/A N/A 12.716±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440288 0.369±0.00 N/A N/A N/A N/A N/A N/A 1.789±0.00 N/A N/A N/A 1.309±0.02 1.260±0.60 11.576±0.00
ENST00000447939 0.268±0.00 N/A N/A N/A N/A N/A N/A 1.441±0.00 0.724±0.00 N/A 16.270±0.00 N/A 0.574±0.00 3.542±0.00
ENST00000452550 N/A N/A N/A N/A N/A N/A 0.830±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.133±0.00
ENSG00000225330 ENST00000416555 N/A N/A N/A 0.063±0.00 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228349 ENST00000431743 N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A 0.035±0.00 2.338±0.00 N/A N/A N/A
ENSG00000235012 ENST00000411867 N/A 0.004±0.00 0.087±0.00 0.058±0.00 0.008±0.00 0.032±0.00 0.041±0.02 0.068±0.00 0.039±0.00 N/A 0.174±0.14 N/A N/A 0.014±0.00
ENSG00000235808 ENST00000450079 0.379±0.00 0.268±0.00 N/A 0.100±0.00 0.048±0.00 0.639±0.00 0.461±0.42 0.372±0.00 N/A 0.047±0.00 0.193±0.00 0.082±0.00 N/A 0.372±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040666 ENSMUST00000048770 1.376±1.26 0.556±0.13 71.397±7.34 0.153±0.07 6.549±5.39 1.037±0.30 34.850±1.18 0.518±0.54 0.204±0.18 0.750±0.12 318.452±13.97 2.212±0.87 1.334±2.02 0.420±0.19
ENSMUST00000123728 N/A N/A N/A N/A 5.480±0.00 N/A N/A N/A 0.070±0.04 N/A N/A 3.678±3.01 0.321±0.14 0.308±0.00
ENSMUST00000129904 N/A 0.450±0.00 N/A 0.235±0.00 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.626±0.00
ENSMUST00000132424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145069 7.535±4.41 1.808±0.56 N/A 0.318±0.14 26.373±15.24 6.678±1.59 87.210±9.04 1.783±0.41 0.168±0.06 3.884±1.54 N/A 7.485±4.02 0.443±0.32 0.481±0.24
ENSMUST00000157060 N/A N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A 10.724±0.00 0.889±0.29 N/A
ENSMUST00000166952 N/A N/A N/A 0.600±0.00 N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A 0.744±0.00 N/A
ENSMUST00000171181 N/A N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A 19.423±3.95 0.445±0.18 0.352±0.00
ENSMUSG00000074892 ENSMUST00000099497 0.031±0.02 N/A 0.081±0.01 2.014±2.12 0.078±0.05 44.498±10.53 0.007±0.00 2.997±1.73 0.036±0.00 N/A 0.010±0.00 1.765±0.47 1.100±1.02 N/A
ENSMUST00000113800 N/A 0.046±0.01 N/A 0.091±0.00 0.094±0.03 38.558±15.14 N/A 2.224±0.00 0.045±0.02 0.306±0.03 N/A 1.108±0.82 0.136±0.00 N/A
ENSMUST00000134058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSMUST00000153586 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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