C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3-binding domain glutamic acid-rich protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040666 Sh3bgr 10090 + 16:96200470-96228933 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048770 Sh3bgr-001 96200470-96228933 protein_coding
  ENSMUST00000123728 Sh3bgr-201 96200671-96228928 protein_coding
  ENSMUST00000129904 Sh3bgr-002 96205719-96220591 protein_coding
  ENSMUST00000132424 Sh3bgr-005 96200729-96224591 protein_coding
  ENSMUST00000145069 Sh3bgr-006 96220499-96228925 protein_coding
  ENSMUST00000157060 Sh3bgr-003 96206643-96224563 protein_coding
  ENSMUST00000166952 Sh3bgr-004 96200704-96220591 protein_coding
  ENSMUST00000171181 Sh3bgr-202 96200671-96224560 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048770ENSMUST00000123728ENSMUST00000129904ENSMUST00000145069ENSMUST00000157060ENSMUST00000166952ENSMUST00000171181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048770 1.376±1.26 0.556±0.13 71.397±7.34 0.153±0.07 6.549±5.39 1.037±0.30 34.850±1.18 0.518±0.54 0.204±0.18 0.750±0.12 318.452±13.97 2.212±0.87 1.334±2.02 0.420±0.19
ENSMUST00000123728 N/A N/A N/A N/A 5.480±0.00 N/A N/A N/A 0.070±0.04 N/A N/A 3.678±3.01 0.321±0.14 0.308±0.00
ENSMUST00000129904 N/A 0.450±0.00 N/A 0.235±0.00 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.626±0.00
ENSMUST00000145069 7.535±4.41 1.808±0.56 N/A 0.318±0.14 26.373±15.24 6.678±1.59 87.210±9.04 1.783±0.41 0.168±0.06 3.884±1.54 N/A 7.485±4.02 0.443±0.32 0.481±0.24
ENSMUST00000157060 N/A N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A 10.724±0.00 0.889±0.29 N/A
ENSMUST00000166952 N/A N/A N/A 0.600±0.00 N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A 0.744±0.00 N/A
ENSMUST00000171181 N/A N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A 19.423±3.95 0.445±0.18 0.352±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WM CIL_0004WM_0002 CGP 16:96158407-96228933
CIL_0005QK CIL_0005QK_0002 CGP 16:96200470-96319859

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005829 IEA cytosol
GO:0008150 ND biological_process
GO:0017124 IEA SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021633 sh3bgr SH3 domain binding glutamic acid-rich protein protein_coding Danio_rerio
ENSG00000185437 SH3BGR SH3 domain binding glutamate-rich protein protein_coding Homo_sapiens

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