C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029841-ENSDARG00000058297 CGP 7955 22:10867998-10884885
GeneTranscriptPositionBiotype
ENSDARG00000029841 (tmprss9)
transmembrane protease, serine 9 		ENSDART00000045303 (tmprss9-201) 10869257-10875340 protein_coding
ENSDART00000145551 (tmprss9-001) 10867998-10880568 protein_coding
ENSDARG00000058297 (timm13)
translocase of inner mitochondrial membrane 13 homolog (yeast) 		ENSDART00000081156 (timm13-001) 10881265-10884885 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178297-ENSG00000099800 CGP 9606 19:2389771-2427894
GeneTranscriptPositionBiotype
ENSG00000099800 (TIMM13)
translocase of inner mitochondrial membrane 13 homolog (yeast) 		ENST00000215570 (TIMM13-001) 2425624-2427894 protein_coding
ENST00000591871 (TIMM13-002) 2426565-2427538 protein_coding
ENSG00000176619 (LMNB2)
lamin B2 		ENST00000325327 (LMNB2-001) 2428166-2456996 protein_coding
ENST00000475819 (LMNB2-002) 2429471-2431829 processed_transcript
ENST00000490554 (LMNB2-003) 2432508-2434959 retained_intron
ENST00000527409 (LMNB2-006) 2434295-2437158 processed_transcript
ENST00000532465 (LMNB2-008) 2427638-2433899 processed_transcript
ENST00000534495 (LMNB2-007) 2435003-2437121 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0005QN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059406-ENSMUSG00000020219 CGP 10090 10:80879720-80900969
GeneTranscriptPositionBiotype
ENSMUSG00000020219 (Timm13)
translocase of inner mitochondrial membrane 13 		ENSMUST00000020440 (Timm13-201) 80899450-80900969 protein_coding
ENSMUSG00000059406 (Tmprss9)
transmembrane protease, serine 9 		ENSMUST00000105333 (Tmprss9-201) 80879720-80899441 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QN_0001ENSDARG00000029841ENSDART00000045303ENSDART00000145551ENSDARG00000058297ENSDART00000081156CIL_0005QN_0002ENSG00000099800ENST00000215570ENST00000591871ENSG00000176619ENST00000325327ENST00000475819ENST00000490554ENST00000527409ENST00000532465ENST00000534495CIL_0005QN_0003ENSMUSG00000020219ENSMUST00000020440ENSMUSG00000059406ENSMUST00000105333
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QN_0001ENSDARG00000029841ENSDART00000045303ENSDART00000145551ENSDARG00000058297ENSDART00000081156CIL_0005QN_0002ENSG00000099800ENST00000215570ENST00000591871ENSG00000176619ENST00000325327ENST00000475819ENST00000490554ENST00000532465CIL_0005QN_0003ENSMUSG00000020219ENSMUST00000020440ENSMUSG00000059406ENSMUST00000105333
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029841 ENSDART00000045303 N/A N/A N/A N/A N/A N/A N/A 0.334±0.29 N/A N/A 0.022±0.00 N/A N/A N/A
ENSDART00000145551 N/A N/A N/A 0.069±0.02 N/A N/A 0.065±0.04 N/A N/A N/A 0.026±0.00 N/A N/A N/A
ENSDARG00000058297 ENSDART00000081156 N/A N/A N/A 12.627±1.36 N/A N/A 13.135±11.43 7.686±6.33 3.698±0.00 N/A 11.227±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099800 ENST00000215570 N/A 8.429±0.00 1.349±0.00 4.844±1.80 6.217±3.64 N/A 3.044±2.32 6.096±3.22 8.162±0.00 N/A 5.935±0.00 20.786±5.15 16.509±3.58 10.719±0.00
ENST00000591871 50.510±0.00 45.944±0.00 3.505±0.00 21.484±0.36 29.650±19.98 33.112±25.07 15.221±11.84 28.723±15.74 45.477±0.00 19.861±16.22 25.570±9.19 54.693±13.09 55.694±14.77 58.411±0.00
ENSG00000176619 ENST00000325327 11.151±0.00 10.073±0.00 0.859±0.00 3.408±2.17 4.516±2.20 7.276±3.97 1.858±1.35 4.734±4.42 1.602±0.85 4.439±3.07 4.830±3.34 19.401±11.70 22.524±5.69 9.439±3.02
ENST00000475819 N/A N/A N/A N/A N/A N/A N/A N/A 3.229±0.00 N/A N/A 6.250±0.00 N/A N/A
ENST00000490554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.296±0.00 55.908±0.00 78.718±0.00
ENST00000527409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.692±0.00
ENST00000534495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020219 ENSMUST00000020440 42.748±5.79 56.734±6.03 35.251±5.06 39.485±18.47 39.717±15.09 52.814±7.66 30.186±9.97 83.941±9.45 56.247±16.51 36.886±4.17 34.677±2.88 44.513±15.80 37.437±14.68 20.980±10.00
ENSMUSG00000059406 ENSMUST00000105333 0.058±0.04 0.109±0.02 0.302±0.01 0.104±0.00 0.073±0.02 0.129±0.04 0.016±0.00 0.170±0.09 0.043±0.02 0.029±0.01 0.035±0.01 0.233±0.15 0.044±0.03 0.829±0.37

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