C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005QV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062017-ENSDARG00000043281 CGP 7955 8:19148776-19191995
GeneTranscriptPositionBiotype
ENSDARG00000043281 (stap2b)
signal transducing adaptor family member 2b 		ENSDART00000100516 (stap2b-201) 19175807-19191995 protein_coding
ENSDARG00000062017 (fsd1)
fibronectin type III and SPRY domain containing 1 		ENSDART00000089141 (fsd1-201) 19148776-19172275 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005QV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105255-ENSG00000178078 CGP 9606 19:4304600-4342786
GeneTranscriptPositionBiotype
ENSG00000105255 (FSD1)
fibronectin type III and SPRY domain containing 1 		ENST00000221856 (FSD1-001) 4304600-4323836 protein_coding
ENST00000594438 (FSD1-011) 4323035-4323665 protein_coding
ENST00000597480 (FSD1-008) 4306001-4323766 protein_coding
ENST00000597590 (FSD1-005) 4304676-4323806 protein_coding
ENST00000598010 (FSD1-010) 4307939-4318950 processed_transcript
ENST00000598179 (FSD1-004) 4311473-4323843 retained_intron
ENST00000599375 (FSD1-002) 4304660-4311131 retained_intron
ENST00000601006 (FSD1-006) 4304689-4323093 protein_coding
ENST00000601678 (FSD1-003) 4304660-4311577 retained_intron
ENST00000601815 (FSD1-009) 4304700-4310755 retained_intron
ENSG00000178078 (STAP2)
signal transducing adaptor family member 2 		ENST00000594605 (STAP2-003) 4324043-4338877 protein_coding
ENST00000596242 (STAP2-008) 4324817-4327370 retained_intron
ENST00000597593 (STAP2-005) 4324610-4328226 processed_transcript
ENST00000598443 (STAP2-009) 4324043-4328773 protein_coding
ENST00000599736 (STAP2-001) 4324044-4342786 nonsense_mediated_decay
ENST00000600324 (STAP2-002) 4324043-4338821 protein_coding
ENST00000601179 (STAP2-004) 4325418-4328993 retained_intron
ENST00000601482 (STAP2-006) 4325459-4338809 protein_coding
ENST00000601956 (STAP2-010) 4324043-4326952 protein_coding
ENST00000602007 (STAP2-007) 4324879-4327384 retained_intron
ENSG00000269425 (AC007292.7)
 ENST00000598582 (AC007292.7-001) 4339577-4343491 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005QV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011589-ENSMUSG00000038781 CGP 10090 17:55986511-56005570
GeneTranscriptPositionBiotype
ENSMUSG00000011589 (Fsd1)
fibronectin type 3 and SPRY domain-containing protein 		ENSMUST00000011733 (Fsd1-201) 55986511-55996881 protein_coding
ENSMUSG00000038781 (Stap2)
signal transducing adaptor family member 2 		ENSMUST00000043785 (Stap2-201) 55997081-56005570 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QV_0001ENSDARG00000043281ENSDART00000100516ENSDARG00000062017ENSDART00000089141CIL_0005QV_0002ENSG00000105255ENST00000221856ENST00000594438ENST00000597480ENST00000597590ENST00000598010ENST00000598179ENST00000599375ENST00000601006ENST00000601678ENST00000601815ENSG00000178078ENST00000594605ENST00000596242ENST00000597593ENST00000598443ENST00000599736ENST00000600324ENST00000601179ENST00000601482ENST00000601956ENST00000602007ENSG00000269425ENST00000598582CIL_0005QV_0003ENSMUSG00000011589ENSMUST00000011733ENSMUSG00000038781ENSMUST00000043785
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QV_0001ENSDARG00000043281ENSDART00000100516ENSDARG00000062017ENSDART00000089141CIL_0005QV_0002ENSG00000105255ENST00000221856ENST00000594438ENST00000597480ENST00000597590ENST00000598010ENST00000598179ENST00000601006ENST00000601678ENST00000601815ENSG00000178078ENST00000594605ENST00000596242ENST00000597593ENST00000598443ENST00000599736ENST00000600324ENST00000601179ENST00000601482ENST00000601956ENST00000602007ENSG00000269425ENST00000598582CIL_0005QV_0003ENSMUSG00000011589ENSMUST00000011733ENSMUSG00000038781ENSMUST00000043785
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043281 ENSDART00000100516 N/A N/A N/A 0.702±0.00 N/A N/A 0.198±0.06 8.115±0.00 0.040±0.00 N/A 0.058±0.00 N/A N/A N/A
ENSDARG00000062017 ENSDART00000089141 N/A N/A N/A 15.843±0.00 N/A N/A 0.085±0.01 0.112±0.00 0.020±0.00 N/A 0.550±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105255 ENST00000221856 N/A N/A N/A 7.281±6.32 N/A 0.078±0.00 N/A N/A N/A N/A N/A 0.279±0.05 0.675±0.05 10.082±0.00
ENST00000594438 N/A N/A N/A N/A N/A 0.489±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597480 N/A 0.430±0.00 N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A
ENST00000597590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 0.727±0.00 4.210±0.00
ENST00000598010 N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.431±0.00 2.282±0.00
ENST00000598179 0.078±0.00 0.365±0.00 N/A N/A 0.200±0.00 0.453±0.00 0.074±0.00 0.020±0.00 0.069±0.00 0.136±0.00 0.103±0.00 0.229±0.11 N/A 1.470±0.00
ENST00000599375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601006 N/A N/A N/A 22.241±0.00 N/A N/A N/A N/A N/A 1.181±0.00 N/A N/A N/A N/A
ENST00000601678 0.100±0.00 0.350±0.00 N/A N/A 0.038±0.00 0.181±0.00 0.015±0.00 0.148±0.00 0.036±0.00 N/A 0.027±0.00 0.050±0.00 N/A N/A
ENST00000601815 N/A N/A N/A N/A N/A N/A N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000178078 ENST00000594605 1.688±0.00 2.235±0.00 1.319±0.00 N/A 2.576±0.00 6.868±0.00 0.334±0.00 6.075±1.31 2.752±2.62 3.757±0.00 N/A 5.998±4.01 3.166±1.58 1.501±0.00
ENST00000596242 N/A N/A N/A N/A N/A N/A 0.746±0.00 N/A N/A N/A 0.217±0.01 N/A N/A N/A
ENST00000597593 N/A N/A N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A N/A 31.511±0.00 N/A N/A
ENST00000598443 2.897±0.00 2.601±0.00 N/A 0.123±0.00 N/A 5.529±0.00 N/A N/A 4.961±0.00 N/A N/A N/A N/A N/A
ENST00000599736 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00
ENST00000600324 0.585±0.00 1.059±0.00 N/A 0.226±0.04 0.868±0.11 4.442±0.00 0.251±0.00 N/A N/A N/A 0.338±0.00 7.491±0.02 2.523±0.73 0.182±0.00
ENST00000601179 N/A N/A N/A N/A 2.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601482 0.998±0.00 N/A N/A N/A 1.031±0.00 N/A N/A 4.240±2.15 0.404±0.00 1.206±0.74 0.191±0.00 8.617±3.22 N/A N/A
ENST00000601956 N/A 4.468±0.00 N/A N/A 3.321±0.00 5.609±0.00 N/A 10.067±0.00 N/A N/A N/A 39.373±0.00 2.505±0.00 1.857±0.73
ENST00000602007 0.944±0.00 N/A N/A 1.209±0.00 N/A N/A 0.173±0.00 N/A N/A 0.280±0.00 N/A N/A 2.893±0.00 1.198±0.03
ENSG00000269425 ENST00000598582 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011589 ENSMUST00000011733 0.804±0.73 0.376±0.15 0.309±0.00 26.949±15.93 0.276±0.21 0.385±0.31 0.060±0.05 0.132±0.06 0.071±0.04 0.067±0.02 N/A 1.501±0.77 0.303±0.19 0.831±0.33
ENSMUSG00000038781 ENSMUST00000043785 7.483±0.64 1.439±0.14 14.124±0.85 1.317±0.62 8.653±3.07 30.572±3.47 6.689±2.11 4.871±0.53 9.370±6.01 18.259±3.01 1.495±0.85 5.145±1.78 8.646±2.93 8.281±0.77

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