C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exostosin glycosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378204 EXT1-001 ENSG00000182197 9606 - 8:117794490-118111853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378204 1.866±0.00 1.981±0.00 0.488±0.00 0.565±0.22 2.773±0.00 1.575±0.00 0.684±0.40 1.646±0.09 1.997±1.54 2.340±1.35 0.176±0.09 2.071±1.03 2.894±1.03 1.965±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RJ CIL_0005RJ_0001 CGP 8:117520713-118111853
CIL_0005RK CIL_0005RK_0001 CGP 8:117794490-118621995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001501 TAS skeletal system development
GO:0001503 IMP ossification
GO:0005783 IDA endoplasmic reticulum
GO:0005789 NAS endoplasmic reticulum membrane
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 IDA glycosaminoglycan biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0007165 TAS signal transduction
GO:0007369 IEA gastrulation
GO:0007411 IEA axon guidance
GO:0007420 IEA brain development
GO:0007492 IEA endoderm development
GO:0007498 IEA mesoderm development
GO:0008375 IDA acetylglucosaminyltransferase activity
GO:0015012 ISS heparan sulfate proteoglycan biosynthetic process
GO:0015014 IMP heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015020 IDA glucuronosyltransferase activity
GO:0016021 TAS integral component of membrane
GO:0016757 IDA transferase activity, transferring glycosyl groups
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0021772 IEA olfactory bulb development
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0031227 IEA intrinsic component of endoplasmic reticulum membrane
GO:0033692 IDA cellular polysaccharide biosynthetic process
GO:0042328 NAS heparan sulfate N-acetylglucosaminyltransferase activity
GO:0042803 IDA protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0046982 IPI protein heterodimerization activity
GO:0050508 ISS glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0050509 ISS N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0072498 IEA embryonic skeletal joint development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077273 Ext1-001 protein_coding Mus_musculus 0 4876
ENSMUST00000133362 Ext1-004 nonsense_mediated_decay Mus_musculus 0 1820
ENSMUST00000110244 Ext1-002 protein_coding Mus_musculus 0 1162
ENSMUST00000140798 Ext1-003 retained_intron Mus_musculus 0 976
ENSDART00000006439 ext1a-001 protein_coding Danio_rerio 0.0000003 64

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