C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006624-ENSDARG00000028067 CGP 7955 10:18907582-18966165
GeneTranscriptPositionBiotype
ENSDARG00000006624 (ppp2r2ab)
protein phosphatase 2, regulatory subunit B, alpha b 		ENSDART00000024127 (ppp2r2ab-201) 18909076-18936891 protein_coding
ENSDART00000138334 (ppp2r2ab-001) 18907582-18936892 protein_coding
ENSDART00000144860 (ppp2r2ab-002) 18922267-18926824 processed_transcript
ENSDARG00000028067 (bnip3lb)
BCL2/adenovirus E1B interacting protein 3-like b 		ENSDART00000030205 (bnip3lb-001) 18941372-18966165 protein_coding
ENSDART00000135786 (bnip3lb-002) 18941395-18964761 processed_transcript

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005TB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000221914-ENSG00000104765 CGP 9606 8:26291491-26505636
GeneTranscriptPositionBiotype
ENSG00000221914 (PPP2R2A)
protein phosphatase 2, regulatory subunit B, alpha 		ENST00000315985 (PPP2R2A-002) 26293216-26370886 protein_coding
ENST00000380737 (PPP2R2A-001) 26291491-26372680 protein_coding
ENST00000517754 (PPP2R2A-003) 26361090-26371129 retained_intron
ENST00000518208 (PPP2R2A-024) 26365098-26370314 retained_intron
ENST00000518215 (PPP2R2A-020) 26354419-26370363 retained_intron
ENST00000518254 (PPP2R2A-017) 26291528-26354630 nonsense_mediated_decay
ENST00000518397 (PPP2R2A-021) 26291614-26361012 nonsense_mediated_decay
ENST00000518890 (PPP2R2A-023) 26360600-26370391 retained_intron
ENST00000519439 (PPP2R2A-018) 26293572-26361085 retained_intron
ENST00000519636 (PPP2R2A-015) 26293216-26360182 processed_transcript
ENST00000520329 (PPP2R2A-010) 26291528-26360281 nonsense_mediated_decay
ENST00000520438 (PPP2R2A-022) 26339919-26360235 processed_transcript
ENST00000521095 (PPP2R2A-009) 26292119-26354550 processed_transcript
ENST00000521484 (PPP2R2A-019) 26293590-26360238 retained_intron
ENST00000521557 (PPP2R2A-016) 26293483-26361033 protein_coding
ENST00000522150 (PPP2R2A-007) 26292113-26339973 processed_transcript
ENST00000522482 (PPP2R2A-014) 26293217-26354637 processed_transcript
ENST00000522535 (PPP2R2A-006) 26291835-26361001 protein_coding
ENST00000523473 (PPP2R2A-008) 26292117-26339973 processed_transcript
ENST00000523925 (PPP2R2A-012) 26293112-26361007 protein_coding
ENST00000523964 (PPP2R2A-011) 26298575-26361044 processed_transcript
ENST00000524099 (PPP2R2A-013) 26293206-26360237 processed_transcript
ENST00000524169 (PPP2R2A-004) 26291539-26370324 protein_coding
ENSG00000228451 (SDAD1P1)
SDA1 domain containing 1 pseudogene 1 		ENST00000519902 (SDAD1P1-002) 26379259-26382953 processed_transcript
ENST00000524156 (SDAD1P1-001) 26379392-26381519 transcribed_processed_pseudogene
ENSG00000251203 (RP11-14I17.1)
 ENST00000515686 (RP11-14I17.1-001) 26433029-26434065 processed_pseudogene
ENSG00000253430 (RP11-14I17.2)
 ENST00000522547 (RP11-14I17.2-001) 26422593-26423929 sense_intronic
ENSG00000254362 (RP11-14I17.3)
 ENST00000518031 (RP11-14I17.3-001) 26440491-26442595 sense_intronic

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TB_0001ENSDARG00000006624ENSDART00000024127ENSDART00000138334ENSDART00000144860ENSDARG00000028067ENSDART00000030205ENSDART00000135786CIL_0005TB_0002ENSG00000221914ENST00000315985ENST00000380737ENST00000517754ENST00000518208ENST00000518215ENST00000518254ENST00000518397ENST00000518890ENST00000519439ENST00000519636ENST00000520329ENST00000520438ENST00000521095ENST00000521484ENST00000521557ENST00000522150ENST00000522482ENST00000522535ENST00000523473ENST00000523925ENST00000523964ENST00000524099ENST00000524169ENSG00000228451ENST00000519902ENST00000524156ENSG00000251203ENST00000515686ENSG00000253430ENST00000522547ENSG00000254362ENST00000518031
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TB_0001ENSDARG00000006624ENSDART00000024127ENSDART00000138334ENSDARG00000028067ENSDART00000030205CIL_0005TB_0002ENSG00000221914ENST00000315985ENST00000380737ENST00000517754ENST00000518208ENST00000518215ENST00000518397ENST00000518890ENST00000524169ENSG00000228451ENST00000519902ENSG00000251203ENST00000515686ENSG00000253430ENST00000522547ENSG00000254362ENST00000518031
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006624 ENSDART00000024127 N/A N/A N/A 7.995±0.17 N/A N/A 2.532±0.43 10.571±0.00 0.471±0.00 N/A 1.845±0.00 N/A N/A N/A
ENSDART00000138334 N/A N/A N/A 1.391±0.00 N/A N/A 1.009±0.00 1.857±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000144860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000028067 ENSDART00000030205 N/A N/A N/A 16.151±2.30 N/A N/A 40.406±1.53 17.501±0.00 3.743±0.00 N/A 53.443±0.00 N/A N/A N/A
ENSDART00000135786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000221914 ENST00000315985 16.163±0.00 7.404±0.00 1.487±0.00 13.253±0.00 12.945±0.00 10.577±0.00 9.171±0.00 10.487±0.00 3.471±0.00 8.263±5.69 11.962±0.00 9.328±3.02 8.535±0.00 9.894±4.90
ENST00000380737 2.578±0.00 2.354±0.00 N/A 6.210±0.06 3.026±0.00 2.510±0.00 1.882±0.80 2.264±0.00 1.674±0.52 2.666±1.14 2.807±1.13 3.533±0.89 3.669±1.55 3.021±0.37
ENST00000517754 N/A 1.402±0.00 1.040±0.00 N/A 2.352±0.00 N/A N/A 1.324±0.00 N/A 3.015±0.10 1.072±0.00 2.208±0.00 N/A N/A
ENST00000518208 N/A N/A N/A N/A N/A N/A N/A 2.535±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518215 N/A N/A N/A 5.204±0.00 5.644±0.00 N/A 3.170±0.00 N/A 7.166±0.00 5.539±0.00 N/A 9.434±0.00 N/A N/A
ENST00000518254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518397 N/A N/A N/A N/A N/A 6.498±0.00 N/A N/A N/A N/A N/A 10.216±0.00 14.019±0.00 9.369±0.00
ENST00000518890 N/A N/A 1.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.348±0.00 27.726±0.00 18.217±0.00
ENSG00000228451 ENST00000519902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A 3.932±0.00
ENST00000524156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251203 ENST00000515686 N/A 0.020±0.00 N/A 0.061±0.00 0.161±0.14 0.213±0.00 0.077±0.00 0.079±0.00 0.607±0.00 N/A 0.035±0.00 0.039±0.01 0.035±0.00 0.341±0.00
ENSG00000253430 ENST00000522547 0.120±0.00 0.516±0.00 N/A 0.404±0.00 N/A 0.140±0.00 0.067±0.00 0.184±0.00 N/A 0.079±0.03 0.027±0.00 N/A N/A 0.060±0.00
ENSG00000254362 ENST00000518031 0.079±0.00 0.381±0.00 N/A 0.116±0.00 0.027±0.00 0.051±0.00 0.075±0.00 0.328±0.00 N/A 0.124±0.00 0.095±0.00 0.251±0.20 N/A 0.214±0.01

Loading