C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315985 PPP2R2A-002 ENSG00000221914 9606 + 8:26293216-26370886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315985 16.163±0.00 7.404±0.00 1.487±0.00 13.253±0.00 12.945±0.00 10.577±0.00 9.171±0.00 10.487±0.00 3.471±0.00 8.263±5.69 11.962±0.00 9.328±3.02 8.535±0.00 9.894±4.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MZ CIL_0007MZ_0001 UCNEbase 8:25894448-26370810
CIL_0005TB CIL_0005TB_0002 CGP 8:26291491-26505636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000159 IEA:IDA protein phosphatase type 2A complex
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000278 TAS mitotic cell cycle
GO:0004722 IDA protein serine/threonine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006470 IDA protein dephosphorylation
GO:0007084 TAS mitotic nuclear envelope reassembly
GO:0007165 IEA signal transduction
GO:0008601 IEA:TAS protein phosphatase type 2A regulator activity
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0043278 IEA response to morphine
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089230 Ppp2r2a-201 protein_coding Mus_musculus 0 2634

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