C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005U0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136536-ENSG00000241399 CGP 9606 2:159712457-159798255
GeneTranscriptPositionBiotype
ENSG00000241399 (CD302)
CD302 molecule 		ENST00000259053 (CD302-001) 159768853-159798242 protein_coding
ENST00000429078 (CD302-201) 159768630-159798255 protein_coding
ENST00000480212 (CD302-002) 159768853-159798242 processed_transcript
ENST00000553424 (CD302-202) 159768630-159798255 protein_coding
ENSG00000248672 (LY75-CD302)
LY75-CD302 readthrough 		ENST00000504764 (LY75-CD302-001) 159771851-159904710 protein_coding
ENST00000505052 (LY75-CD302-002) 159771851-159904710 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005U0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026977-ENSMUSG00000060703 CGP 10090 2:60209887-60284488
GeneTranscriptPositionBiotype
ENSMUSG00000026977 (March7)
membrane-associated ring finger (C3HC4) 7 		ENSMUST00000067542 (March7-201) 60224769-60247957 protein_coding
ENSMUST00000102747 (March7-003) 60210073-60247973 protein_coding
ENSMUST00000102748 (March7-001) 60209887-60249211 protein_coding
ENSMUST00000126986 (March7-005) 60243069-60247955 processed_transcript
ENSMUST00000131813 (March7-008) 60232103-60234393 processed_transcript
ENSMUST00000134905 (March7-004) 60236888-60243136 processed_transcript
ENSMUST00000136367 (March7-007) 60247343-60247957 processed_transcript
ENSMUST00000142485 (March7-006) 60236754-60247957 protein_coding
ENSMUST00000143806 (March7-002) 60209913-60250676 processed_transcript
ENSMUSG00000060703 (Cd302)
CD302 antigen 		ENSMUST00000028356 (Cd302-002) 60251993-60284418 protein_coding
ENSMUST00000074606 (Cd302-001) 60251993-60284488 protein_coding
ENSMUSG00000080198 (Gm13573)
predicted gene 13573 		ENSMUST00000116410 (Gm13573-001) 60274944-60275574 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U0_0001ENSG00000241399ENST00000259053ENST00000429078ENST00000480212ENST00000553424ENSG00000248672ENST00000504764ENST00000505052CIL_0005U0_0002ENSMUSG00000026977ENSMUST00000067542ENSMUST00000102747ENSMUST00000102748ENSMUST00000126986ENSMUST00000131813ENSMUST00000134905ENSMUST00000136367ENSMUST00000142485ENSMUST00000143806ENSMUSG00000060703ENSMUST00000028356ENSMUST00000074606ENSMUSG00000080198ENSMUST00000116410
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U0_0001ENSG00000241399ENST00000259053ENST00000429078ENST00000553424ENSG00000248672ENST00000504764CIL_0005U0_0002ENSMUSG00000026977ENSMUST00000067542ENSMUST00000102747ENSMUST00000102748ENSMUST00000126986ENSMUST00000134905ENSMUST00000142485ENSMUST00000143806ENSMUSG00000060703ENSMUST00000028356ENSMUST00000074606ENSMUSG00000080198ENSMUST00000116410
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000241399 ENST00000259053 17.613±0.00 5.484±0.00 N/A 3.644±0.00 7.934±0.39 13.781±0.00 3.763±1.99 17.830±9.04 22.138±13.43 16.052±1.91 N/A 6.744±1.55 3.474±0.87 7.550±2.70
ENST00000429078 N/A N/A N/A 2.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553424 11.425±0.00 5.901±0.00 2.809±0.00 3.261±0.00 5.306±1.23 6.798±2.49 2.145±0.76 14.730±9.33 14.492±8.03 9.178±0.00 N/A 9.452±1.97 2.152±0.02 10.342±0.00
ENSG00000248672 ENST00000504764 N/A N/A N/A N/A N/A 2.171±0.00 N/A N/A N/A 5.089±0.00 N/A 5.940±0.00 N/A N/A
ENST00000505052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026977 ENSMUST00000067542 2.799±0.88 2.177±0.52 N/A N/A 2.600±0.72 4.190±0.61 N/A 1.979±0.59 1.132±0.37 2.596±1.00 N/A 7.294±1.38 N/A 5.916±1.04
ENSMUST00000102747 N/A N/A N/A 4.582±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.067±0.00 4.413±2.86
ENSMUST00000102748 4.203±1.21 4.181±1.83 15.712±1.99 15.028±7.63 4.284±0.75 4.067±0.84 3.096±0.17 3.483±0.91 6.423±3.32 5.245±1.88 7.209±0.68 6.322±3.49 13.696±2.27 4.878±1.46
ENSMUST00000126986 1.783±0.30 2.141±0.43 6.964±1.53 10.148±0.48 2.620±0.15 2.576±0.00 1.378±0.14 1.080±0.29 2.496±1.35 3.439±1.14 1.493±0.08 3.663±0.63 4.508±0.60 N/A
ENSMUST00000131813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134905 2.562±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142485 N/A N/A N/A 20.759±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 33.986±5.37 10.600±0.00
ENSMUST00000143806 N/A N/A N/A N/A 0.930±0.01 1.105±0.01 N/A 0.449±0.00 N/A N/A N/A 1.532±0.16 N/A N/A
ENSMUSG00000060703 ENSMUST00000028356 9.266±0.00 6.863±2.91 N/A N/A 4.841±1.48 2.750±0.91 N/A N/A N/A 7.735±0.56 0.581±0.00 14.683±4.81 1.045±0.05 2.388±0.00
ENSMUST00000074606 47.067±20.40 7.502±0.86 13.609±0.10 3.500±2.70 22.128±4.00 2.100±1.05 4.978±0.85 25.211±1.80 86.134±53.89 16.521±1.00 3.184±0.42 10.792±9.47 2.750±3.54 4.809±0.60
ENSMUSG00000080198 ENSMUST00000116410 0.144±0.05 0.098±0.00 0.210±0.00 4.389±6.11 N/A N/A N/A 0.125±0.00 0.328±0.17 0.139±0.08 0.288±0.13 0.894±0.16 0.505±0.52 1.015±1.26

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