C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067542 March7-201 ENSMUSG00000026977 10090 + 2:60224769-60247957 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000067542
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000067542 2.799±0.88 2.177±0.52 2.600±0.72 4.190±0.61 1.979±0.59 1.132±0.37 2.596±1.00 7.294±1.38 5.916±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U1 CIL_0005U1_0002 CGP 2:59899363-60250676
CIL_0005U0 CIL_0005U0_0002 CGP 2:60209887-60284488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259050 MARCH7-001 protein_coding Homo_sapiens 0 2455
ENST00000409175 MARCH7-002 protein_coding Homo_sapiens 0 2455
ENST00000409591 MARCH7-003 protein_coding Homo_sapiens 0 2261
ENST00000420397 MARCH7-007 protein_coding Homo_sapiens 0 438
ENST00000421037 MARCH7-005 protein_coding Homo_sapiens 0 333
ENST00000461582 MARCH7-006 processed_transcript Homo_sapiens 0 239
ENST00000473749 MARCH7-004 processed_transcript Homo_sapiens 0 363
ENST00000478396 MARCH7-008 processed_transcript Homo_sapiens 0 344
ENST00000539065 MARCH7-201 protein_coding Homo_sapiens 0 1694

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