C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005V1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017220-ENSDARG00000069755 CGP 7955 16:48995025-49155663
GeneTranscriptPositionBiotype
ENSDARG00000017220 (otud7b)
OTU domain containing 7B 		ENSDART00000041811 (otud7b-001) 48995104-49046720 protein_coding
ENSDART00000124689 (otud7b-002) 48995025-49044904 protein_coding
ENSDART00000128840 (otud7b-201) 49025489-49054579 protein_coding
ENSDARG00000069755 (mtmr11)
myotubularin related protein 11 		ENSDART00000101753 (mtmr11-001) 49065019-49155663 protein_coding
ENSDARG00000085137 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120537 (5S_rRNA.1033-201) 49140364-49140480 rRNA

Danio rerio Ensembl (Zv9)

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CIL_0005V1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038495-ENSMUSG00000045934 CGP 10090 3:96104527-96171718
GeneTranscriptPositionBiotype
ENSMUSG00000038495 (Otud7b)
OTU domain containing 7B 		ENSMUST00000035519 (Otud7b-201) 96104527-96161129 protein_coding
ENSMUST00000090785 (Otud7b-001) 96104527-96161129 protein_coding
ENSMUST00000098849 (Otud7b-002) 96107087-96161129 protein_coding
ENSMUST00000132980 (Otud7b-004) 96104527-96141518 protein_coding
ENSMUST00000135263 (Otud7b-006) 96150704-96152563 processed_transcript
ENSMUST00000138206 (Otud7b-003) 96104527-96144325 protein_coding
ENSMUST00000146660 (Otud7b-005) 96104548-96141553 processed_transcript
ENSMUSG00000045934 (Mtmr11)
myotubularin related protein 11 		ENSMUST00000054356 (Mtmr11-001) 96162004-96171718 protein_coding
ENSMUST00000123520 (Mtmr11-005) 96162166-96163396 processed_transcript
ENSMUST00000129925 (Mtmr11-002) 96162085-96171718 nonsense_mediated_decay
ENSMUST00000147245 (Mtmr11-004) 96162004-96171717 retained_intron
ENSMUST00000152763 (Mtmr11-006) 96168876-96169994 processed_transcript
ENSMUST00000154955 (Mtmr11-003) 96162589-96171718 processed_transcript
ENSMUSG00000097204 (Gm17690)
predicted gene, 17690 		ENSMUST00000180958 (Gm17690-201) 96167464-96172414 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V1_0001ENSDARG00000017220ENSDART00000041811ENSDART00000124689ENSDART00000128840ENSDARG00000069755ENSDART00000101753ENSDARG00000085137ENSDART00000120537CIL_0005V1_0002ENSMUSG00000038495ENSMUST00000035519ENSMUST00000090785ENSMUST00000098849ENSMUST00000132980ENSMUST00000135263ENSMUST00000138206ENSMUST00000146660ENSMUSG00000045934ENSMUST00000054356ENSMUST00000123520ENSMUST00000129925ENSMUST00000147245ENSMUST00000152763ENSMUST00000154955ENSMUSG00000097204ENSMUST00000180958
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V1_0001ENSDARG00000017220ENSDART00000041811ENSDART00000128840ENSDARG00000069755ENSDART00000101753ENSDARG00000085137ENSDART00000120537CIL_0005V1_0002ENSMUSG00000038495ENSMUST00000035519ENSMUST00000090785ENSMUST00000098849ENSMUST00000138206ENSMUST00000146660ENSMUSG00000045934ENSMUST00000054356ENSMUST00000154955ENSMUSG00000097204ENSMUST00000180958
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017220 ENSDART00000041811 N/A N/A N/A N/A N/A N/A 1.650±0.00 1.620±0.00 0.752±0.00 N/A N/A N/A N/A N/A
ENSDART00000124689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000128840 N/A N/A N/A 2.807±0.00 N/A N/A 2.752±1.07 0.961±0.38 0.202±0.00 N/A 1.866±0.00 N/A N/A N/A
ENSDARG00000069755 ENSDART00000101753 N/A N/A N/A 4.030±0.00 N/A N/A 1.284±0.29 1.255±0.07 0.126±0.00 N/A 0.234±0.00 N/A N/A N/A
ENSDARG00000085137 ENSDART00000120537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.423±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038495 ENSMUST00000035519 2.598±1.42 4.433±0.79 4.925±0.32 1.358±0.19 2.645±1.15 3.107±1.25 2.365±0.37 3.227±1.44 2.221±0.60 9.754±1.94 3.501±0.00 4.214±1.23 3.962±2.57 4.541±2.06
ENSMUST00000090785 1.041±0.00 N/A N/A 2.127±0.00 N/A 1.230±0.00 0.792±0.30 0.654±0.02 0.556±0.26 N/A N/A 1.043±0.00 N/A N/A
ENSMUST00000098849 N/A 1.334±0.00 N/A 0.670±0.00 N/A N/A 0.848±0.00 N/A N/A N/A N/A N/A N/A 5.223±0.10
ENSMUST00000132980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138206 N/A 6.711±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146660 N/A 9.156±1.40 N/A N/A 7.601±0.00 N/A N/A N/A N/A N/A N/A 13.467±0.00 N/A N/A
ENSMUSG00000045934 ENSMUST00000054356 4.707±2.27 13.079±0.07 6.581±0.92 N/A N/A 9.911±0.33 1.284±0.26 9.902±1.39 2.879±0.00 4.455±0.00 0.673±0.10 5.749±2.52 4.454±2.69 N/A
ENSMUST00000123520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154955 N/A N/A N/A N/A 6.081±0.00 10.577±0.00 N/A 8.409±0.00 N/A N/A 0.540±0.00 N/A N/A N/A
ENSMUSG00000097204 ENSMUST00000180958 2.754±0.81 N/A 3.869±0.00 0.550±0.00 3.766±0.00 N/A 1.177±0.22 5.274±0.51 2.367±0.31 N/A 0.869±0.16 2.761±1.00 1.932±0.90 N/A

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