C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 7B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090785 Otud7b-001 ENSMUSG00000038495 10090 + 3:96104527-96161129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverOvaryENSMUST00000090785
Transcript ID Adipose Brain Colon Heart Kidney Liver Ovary
ENSMUST00000090785 1.041±0.00 2.127±0.00 1.230±0.00 0.792±0.30 0.654±0.02 0.556±0.26 1.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V1 CIL_0005V1_0002 CGP 3:96104527-96171718

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0002385 IMP mucosal immune response
GO:0003677 IEA DNA binding
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0008234 IMP cysteine-type peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016579 IDA protein deubiquitination
GO:0032717 IEA negative regulation of interleukin-8 production
GO:0035871 ISS protein K11-linked deubiquitination
GO:0043124 IMP negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070530 IDA K63-linked polyubiquitin binding
GO:0070536 ISS protein K63-linked deubiquitination
GO:0071108 IMP protein K48-linked deubiquitination
GO:1900181 IEA negative regulation of protein localization to nucleus
GO:1990380 IEA Lys48-specific deubiquitinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263791 EIF2AK4-001 protein_coding Homo_sapiens 0.0004 53
ENST00000293778 CXCL16-001 protein_coding Homo_sapiens 0.000003 58
ENST00000417191 OTUD7B-003 protein_coding Homo_sapiens 0 1727
ENST00000462432 CPSF3L-005 processed_transcript Homo_sapiens 0.00005 55
ENST00000558557 EIF2AK4-005 retained_intron Homo_sapiens 0.0002 53
ENST00000558629 EIF2AK4-004 retained_intron Homo_sapiens 0.0003 53
ENST00000558823 EIF2AK4-009 protein_coding Homo_sapiens 0.00004 53
ENST00000560855 EIF2AK4-003 protein_coding Homo_sapiens 0.0003 53
ENST00000565109 ADAT1-007 processed_transcript Homo_sapiens 0.00001 55
ENST00000576153 CXCL16-003 processed_transcript Homo_sapiens 0.000002 58
ENST00000581312 OTUD7B-001 protein_coding Homo_sapiens 0 3271
ENST00000619871 OTUD7B-002 retained_intron Homo_sapiens 0 444

Loading