C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165181-ENSG00000148154 CGP 9606 9:111686173-111935369
GeneTranscriptPositionBiotype
ENSG00000148154 (UGCG)
UDP-glucose ceramide glucosyltransferase 		ENST00000374279 (UGCG-001) 111896766-111935369 protein_coding
ENST00000474306 (UGCG-004) 111929249-111931308 processed_transcript
ENST00000489355 (UGCG-002) 111897177-111914993 processed_transcript
ENST00000490110 (UGCG-003) 111897201-111926426 processed_transcript
ENST00000495085 (UGCG-005) 111897201-111929666 processed_transcript
ENSG00000165181 (C9orf84)
chromosome 9 open reading frame 84 		ENST00000318737 (C9orf84-001) 111686573-111783493 protein_coding
ENST00000374283 (C9orf84-002) 111737869-111795008 protein_coding
ENST00000374287 (C9orf84-201) 111686519-111781129 protein_coding
ENST00000394777 (C9orf84-004) 111686173-111759533 protein_coding
ENST00000394779 (C9orf84-003) 111686173-111759533 protein_coding
ENSG00000224067 (RP11-430K21.2)
 ENST00000424412 (RP11-430K21.2-001) 111802980-111803435 processed_pseudogene
ENSG00000266315 (MIR4668)
microRNA 4668 		ENST00000582284 (MIR4668-201) 111932100-111932169 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005XB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038598-ENSMUSG00000028381 CGP 10090 4:59043753-59222833
GeneTranscriptPositionBiotype
ENSMUSG00000028381 (Ugcg)
UDP-glucose ceramide glucosyltransferase 		ENSMUST00000030074 (Ugcg-001) 59189257-59222833 protein_coding
ENSMUST00000128227 (Ugcg-003) 59211720-59213909 processed_transcript
ENSMUST00000133996 (Ugcg-002) 59189558-59212203 processed_transcript
ENSMUST00000155153 (Ugcg-004) 59212656-59214293 processed_transcript
ENSMUSG00000038598 (AI481877)
expressed sequence AI481877 		ENSMUST00000107547 (AI481877-001) 59043753-59138983 protein_coding
ENSMUST00000122832 (AI481877-002) 59081132-59111113 retained_intron
ENSMUSG00000081432 (Gm12593)
predicted gene 12593 		ENSMUST00000120981 (Gm12593-001) 59090187-59090929 processed_pseudogene
ENSMUSG00000082978 (Rpsa-ps11)
ribosomal protein SA, pseudogene 11 		ENSMUST00000118446 (Rpsa-ps11-001) 59162268-59163156 processed_pseudogene
ENSMUSG00000086660 (Gm12594)
predicted gene 12594 		ENSMUST00000132140 (Gm12594-001) 59135068-59137454 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XB_0001ENSG00000148154ENST00000374279ENST00000474306ENST00000489355ENST00000490110ENST00000495085ENSG00000165181ENST00000318737ENST00000374283ENST00000374287ENST00000394777ENST00000394779ENSG00000224067ENST00000424412ENSG00000266315ENST00000582284CIL_0005XB_0002ENSMUSG00000028381ENSMUST00000030074ENSMUST00000128227ENSMUST00000133996ENSMUST00000155153ENSMUSG00000038598ENSMUST00000107547ENSMUST00000122832ENSMUSG00000081432ENSMUST00000120981ENSMUSG00000082978ENSMUST00000118446ENSMUSG00000086660ENSMUST00000132140
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XB_0001ENSG00000148154ENST00000374279ENST00000495085ENSG00000165181ENST00000318737ENST00000374283ENST00000374287ENST00000394777ENSG00000224067ENST00000424412ENSG00000266315ENST00000582284CIL_0005XB_0002ENSMUSG00000028381ENSMUST00000030074ENSMUST00000133996ENSMUSG00000038598ENSMUST00000107547ENSMUST00000122832ENSMUSG00000081432ENSMUST00000120981ENSMUSG00000082978ENSMUST00000118446ENSMUSG00000086660ENSMUST00000132140
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148154 ENST00000374279 14.297±0.00 19.814±0.00 0.612±0.00 6.059±2.23 4.850±0.42 6.425±3.73 2.614±1.58 7.464±4.35 2.905±0.21 21.530±14.03 2.076±1.54 6.530±2.08 6.654±1.45 3.306±0.76
ENST00000474306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.220±0.00 2.062±0.00
ENSG00000165181 ENST00000318737 N/A N/A N/A N/A N/A N/A 0.012±0.00 0.109±0.00 0.003±0.00 0.087±0.00 N/A 0.061±0.00 0.006±0.00 5.059±1.54
ENST00000374283 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A
ENST00000374287 N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.00 0.054±0.00 N/A
ENST00000394777 0.017±0.00 N/A N/A N/A N/A 0.175±0.00 0.039±0.01 N/A 0.446±0.00 N/A N/A N/A N/A 2.850±0.00
ENST00000394779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224067 ENST00000424412 N/A 0.317±0.00 N/A N/A 0.070±0.00 0.815±0.00 N/A 0.068±0.00 N/A 0.245±0.00 N/A 0.148±0.00 N/A 0.241±0.00
ENSG00000266315 ENST00000582284 0.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.953±0.00 N/A N/A N/A 0.360±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028381 ENSMUST00000030074 11.333±2.34 5.989±2.65 18.927±2.82 11.813±8.06 15.585±6.59 29.657±7.13 6.208±0.27 5.132±1.13 13.432±7.03 17.407±5.38 1.556±0.73 17.445±6.33 11.448±8.27 4.532±2.29
ENSMUST00000128227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133996 17.774±2.83 78.457±27.75 N/A N/A 53.955±8.93 34.864±10.18 N/A 5.109±0.87 8.212±1.19 34.017±11.67 N/A 30.895±6.08 N/A N/A
ENSMUST00000155153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038598 ENSMUST00000107547 0.012±0.00 N/A 0.004±0.00 0.015±0.00 0.011±0.00 0.057±0.01 N/A 0.008±0.00 0.002±0.00 0.024±0.00 N/A 0.026±0.01 0.010±0.01 0.544±0.25
ENSMUST00000122832 N/A N/A N/A N/A 0.075±0.00 0.114±0.01 N/A N/A N/A 0.038±0.00 N/A 0.122±0.04 0.072±0.08 0.640±0.21
ENSMUSG00000081432 ENSMUST00000120981 N/A N/A N/A N/A N/A 0.409±0.03 N/A N/A N/A N/A N/A N/A 0.059±0.00 0.694±0.29
ENSMUSG00000082978 ENSMUST00000118446 0.101±0.06 0.063±0.00 0.015±0.00 0.038±0.02 0.159±0.12 0.079±0.03 0.080±0.04 0.066±0.00 0.062±0.05 0.062±0.01 0.085±0.03 0.225±0.13 0.091±0.06 0.327±0.12
ENSMUSG00000086660 ENSMUST00000132140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00

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