C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12593
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120981 Gm12593-001 ENSMUSG00000081432 10090 + 4:59090187-59090929 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonPlacentaTestisENSMUST00000120981
Transcript ID Colon Placenta Testis
ENSMUST00000120981 0.409±0.03 0.059±0.00 0.694±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XC CIL_0005XC_0002 CGP 4:59035088-59138983
CIL_0005XB CIL_0005XB_0002 CGP 4:59043753-59222833

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 387
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 556
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 422
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 377
ENST00000399343 CTA-215D11.4-001 processed_pseudogene Homo_sapiens 0 368
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000413552 AC003080.4-001 processed_pseudogene Homo_sapiens 0 316
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 442
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 442
ENST00000424559 AC000089.3-001 processed_pseudogene Homo_sapiens 0 512
ENST00000425027 RP11-55K22.2-001 transcribed_processed_pseudogene Homo_sapiens 0 368
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 470
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 501
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 464
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 442
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 448
ENST00000437848 RP11-767N6.2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 381
ENST00000444758 RP11-508N12.3-001 processed_pseudogene Homo_sapiens 0 287
ENST00000444895 RP11-73E6.2-001 processed_pseudogene Homo_sapiens 0 320
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 464
ENST00000446956 RPL7AP15-001 processed_pseudogene Homo_sapiens 0 363
ENST00000451120 RPL7AP71-001 processed_pseudogene Homo_sapiens 0 224
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 442
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 448
ENST00000455141 RP11-84O12.2-001 processed_pseudogene Homo_sapiens 0 329
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 337
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 556
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 507
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 228
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 518
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000481016 RPL7AP10-001 processed_pseudogene Homo_sapiens 0 372
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 520
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 353
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 396
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 505
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 407
ENST00000489392 RPL7A-007 processed_transcript Homo_sapiens 0 510
ENST00000492798 RPL7A-008 processed_transcript Homo_sapiens 0 228
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000521552 RPL7AP33-001 processed_pseudogene Homo_sapiens 0 374
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 385
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 331
ENST00000574864 RP11-55K22.2-002 processed_transcript Homo_sapiens 0 368

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