C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128607-ENSG00000146842 CGP 9606 7:130070510-130207770
GeneTranscriptPositionBiotype
ENSG00000128607 (KLHDC10)
kelch domain containing 10 		ENST00000335420 (KLHDC10-001) 130070510-130135720 protein_coding
ENST00000463413 (KLHDC10-003) 130070550-130120769 protein_coding
ENST00000468226 (KLHDC10-005) 130070772-130124534 protein_coding
ENST00000495724 (KLHDC10-004) 130116445-130117666 processed_transcript
ENSG00000146842 (TMEM209)
transmembrane protein 209 		ENST00000397622 (TMEM209-001) 130164715-130205498 protein_coding
ENST00000462753 (TMEM209-004) 130166078-130205348 protein_coding
ENST00000467599 (TMEM209-006) 130178459-130182057 retained_intron
ENST00000471077 (TMEM209-003) 130203815-130205382 protein_coding
ENST00000471985 (TMEM209-002) 130201983-130207770 protein_coding
ENST00000473456 (TMEM209-008) 130166078-130205403 protein_coding
ENST00000479804 (TMEM209-005) 130175176-130178461 retained_intron
ENSG00000229196 (RP11-775D22.2)
 ENST00000469264 (RP11-775D22.2-002) 130141731-130142539 antisense
ENST00000470348 (RP11-775D22.2-001) 130141738-130142615 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0005Y2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029775-ENSMUSG00000029782 CGP 10090 6:30401868-30509783
GeneTranscriptPositionBiotype
ENSMUSG00000029775 (Klhdc10)
kelch domain containing 10 		ENSMUST00000068240 (Klhdc10-002) 30401868-30453288 protein_coding
ENSMUST00000068259 (Klhdc10-001) 30401896-30455179 protein_coding
ENSMUST00000123494 (Klhdc10-006) 30417045-30447447 processed_transcript
ENSMUST00000132581 (Klhdc10-005) 30401998-30450562 processed_transcript
ENSMUST00000135566 (Klhdc10-007) 30427396-30441892 retained_intron
ENSMUST00000144272 (Klhdc10-003) 30417036-30450814 processed_transcript
ENSMUST00000150854 (Klhdc10-004) 30443770-30450841 retained_intron
ENSMUSG00000085470 (1700012C14Rik)
RIKEN cDNA 1700012C14 gene 		ENSMUST00000132023 (1700012C14Rik-001) 30460985-30463313 antisense
ENSMUST00000143687 (1700012C14Rik-002) 30460128-30463261 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y2_0001ENSG00000128607ENST00000335420ENST00000463413ENST00000468226ENST00000495724ENSG00000146842ENST00000397622ENST00000462753ENST00000467599ENST00000471077ENST00000471985ENST00000473456ENST00000479804ENSG00000229196ENST00000469264ENST00000470348CIL_0005Y2_0002ENSMUSG00000029775ENSMUST00000068240ENSMUST00000068259ENSMUST00000123494ENSMUST00000132581ENSMUST00000135566ENSMUST00000144272ENSMUST00000150854ENSMUSG00000085470ENSMUST00000132023ENSMUST00000143687
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y2_0001ENSG00000128607ENST00000335420ENST00000463413ENST00000468226ENSG00000146842ENST00000397622ENST00000462753ENST00000473456ENSG00000229196ENST00000469264ENST00000470348CIL_0005Y2_0002ENSMUSG00000029775ENSMUST00000068240ENSMUST00000068259ENSMUST00000123494ENSMUST00000144272ENSMUSG00000085470ENSMUST00000132023ENSMUST00000143687
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128607 ENST00000335420 N/A N/A 0.819±0.00 0.778±0.00 N/A N/A 0.246±0.00 5.217±1.04 1.203±0.00 N/A N/A 1.049±0.27 0.937±0.03 2.287±0.04
ENST00000463413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.083±0.00
ENST00000468226 N/A N/A N/A 7.592±0.00 6.275±0.00 3.989±0.00 3.315±0.00 N/A 6.627±0.00 N/A N/A 8.544±0.00 N/A 16.086±0.67
ENST00000495724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146842 ENST00000397622 2.630±0.00 4.298±0.00 0.624±0.00 3.171±1.35 3.191±1.54 1.263±0.00 1.671±0.00 2.561±0.15 1.335±0.62 0.573±0.33 1.491±1.20 3.955±0.65 1.427±1.00 4.015±0.01
ENST00000462753 N/A N/A 0.675±0.00 N/A N/A N/A N/A N/A N/A 1.402±0.00 0.510±0.00 N/A N/A N/A
ENST00000467599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473456 1.257±0.00 N/A N/A 2.432±0.00 1.553±0.00 0.752±0.00 0.631±0.11 N/A 1.498±0.00 1.018±0.00 N/A 1.995±0.24 1.040±0.00 3.147±0.00
ENST00000479804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229196 ENST00000469264 N/A N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A 0.274±0.00 N/A 0.648±0.00 0.260±0.03 0.439±0.00
ENST00000470348 N/A N/A N/A N/A 0.084±0.00 N/A N/A 0.080±0.00 N/A 0.636±0.00 N/A 0.331±0.08 0.218±0.00 0.202±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029775 ENSMUST00000068240 3.322±0.00 N/A N/A 8.719±0.00 N/A 2.119±0.00 N/A N/A N/A N/A N/A 7.170±0.00 4.019±1.31 3.026±1.00
ENSMUST00000068259 6.255±5.43 3.063±0.80 4.619±0.04 38.855±3.55 3.731±2.81 4.078±2.30 5.386±0.16 7.577±2.37 4.544±2.92 3.562±0.73 2.351±1.49 3.136±1.11 6.319±4.22 4.500±1.96
ENSMUST00000123494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.798±3.86
ENSMUST00000132581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.080±3.38
ENSMUST00000150854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085470 ENSMUST00000132023 N/A 0.125±0.02 0.045±0.00 0.373±0.00 0.079±0.00 N/A N/A N/A 0.122±0.04 N/A N/A 0.501±0.16 0.107±0.01 5.090±2.66
ENSMUST00000143687 0.138±0.00 0.519±0.37 N/A N/A N/A N/A N/A 0.140±0.06 0.255±0.18 0.130±0.01 N/A 0.511±0.16 0.104±0.06 2.736±1.52

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