C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 209
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473456 TMEM209-008 ENSG00000146842 9606 - 7:130166078-130205403 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000473456
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000473456 1.257±0.00 2.432±0.00 1.553±0.00 0.752±0.00 0.631±0.11 1.498±0.00 1.018±0.00 1.995±0.24 1.040±0.00 3.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y2 CIL_0005Y2_0001 CGP 7:130070510-130207770
CIL_0008PP CIL_0008PP_0001 VISTA 7:130073108-130674619
CIL_000273 CIL_000273_0001 CGP 7:130164715-130216843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102991 Tmem209-006 protein_coding Mus_musculus 0 1949
ENSMUST00000115160 Tmem209-001 protein_coding Mus_musculus 0 1387
ENSMUST00000138823 Tmem209-003 nonsense_mediated_decay Mus_musculus 0 1387
ENSMUST00000115157 Tmem209-005 protein_coding Mus_musculus 0 1382
ENSMUST00000064330 Tmem209-004 protein_coding Mus_musculus 0 1256
ENSMUST00000151187 Tmem209-002 nonsense_mediated_decay Mus_musculus 0 1203
ENSMUST00000154547 Tmem209-008 processed_transcript Mus_musculus 0 621
ENSMUST00000148638 Tmem209-009 protein_coding Mus_musculus 0 257
ENSMUST00000150480 Tmem209-007 retained_intron Mus_musculus 0 257
ENSDART00000075533 tmem209-201 protein_coding Danio_rerio 0 254
ENSDART00000136096 tmem209-001 protein_coding Danio_rerio 0 254

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