C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 209
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397622 TMEM209-001 ENSG00000146842 9606 - 7:130164715-130205498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397622 2.630±0.00 4.298±0.00 0.624±0.00 3.171±1.35 3.191±1.54 1.263±0.00 1.671±0.00 2.561±0.15 1.335±0.62 0.573±0.33 1.491±1.20 3.955±0.65 1.427±1.00 4.015±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y2 CIL_0005Y2_0001 CGP 7:130070510-130207770
CIL_0008PP CIL_0008PP_0001 VISTA 7:130073108-130674619
CIL_000273 CIL_000273_0001 CGP 7:130164715-130216843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115160 Tmem209-001 protein_coding Mus_musculus 0 2100
ENSMUST00000138823 Tmem209-003 nonsense_mediated_decay Mus_musculus 0 2082
ENSMUST00000115157 Tmem209-005 protein_coding Mus_musculus 0 2076
ENSMUST00000151187 Tmem209-002 nonsense_mediated_decay Mus_musculus 0 1897
ENSMUST00000102991 Tmem209-006 protein_coding Mus_musculus 0 1387
ENSMUST00000064330 Tmem209-004 protein_coding Mus_musculus 0 1256
ENSMUST00000154547 Tmem209-008 processed_transcript Mus_musculus 0 621
ENSDART00000075533 tmem209-201 protein_coding Danio_rerio 0 316
ENSDART00000136096 tmem209-001 protein_coding Danio_rerio 0 316
ENSMUST00000148638 Tmem209-009 protein_coding Mus_musculus 0 263
ENSMUST00000150480 Tmem209-007 retained_intron Mus_musculus 0 263
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000001 60

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