C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000618_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173409-ENSG00000182118 CGP 9606 1:230978981-231040246
GeneTranscriptPositionBiotype
ENSG00000173409 (ARV1)
ARV1 homolog (S. cerevisiae) 		ENST00000310256 (ARV1-001) 230979049-231000595 protein_coding
ENST00000366658 (ARV1-003) 230979094-231000595 protein_coding
ENST00000435927 (ARV1-005) 230979146-230997267 protein_coding
ENST00000450711 (ARV1-007) 230979116-230999803 protein_coding
ENST00000459891 (ARV1-006) 230995760-231000595 nonsense_mediated_decay
ENST00000480519 (ARV1-002) 230979111-230999867 nonsense_mediated_decay
ENST00000497753 (ARV1-004) 230978981-230997154 processed_transcript
ENSG00000182118 (FAM89A)
family with sequence similarity 89, member A 		ENST00000366654 (FAM89A-001) 231018958-231040246 protein_coding
ENST00000466258 (FAM89A-003) 231019418-231028732 processed_transcript
ENST00000494111 (FAM89A-002) 231019176-231026949 processed_transcript
ENSG00000227934 (RP11-423F24.3)
 ENST00000413346 (RP11-423F24.3-001) 231021611-231022183 processed_pseudogene
ENSG00000252131 (AL844165.1)
 ENST00000516322 (AL844165.1-201) 230988989-230989123 miRNA
CIL_000618_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031982-ENSMUSG00000043068 CGP 10090 8:124722139-124751809
GeneTranscriptPositionBiotype
ENSMUSG00000031982 (Arv1)
ARV1 homolog (yeast) 		ENSMUST00000034463 (Arv1-201) 124722139-124734123 protein_coding
ENSMUSG00000043068 (Fam89a)
family with sequence similarity 89, member A 		ENSMUST00000055257 (Fam89a-201) 124740257-124751809 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000618_0001ENSG00000173409ENST00000310256ENST00000366658ENST00000435927ENST00000450711ENST00000459891ENST00000480519ENST00000497753ENSG00000182118ENST00000366654ENST00000466258ENST00000494111ENSG00000227934ENST00000413346ENSG00000252131ENST00000516322CIL_000618_0002ENSMUSG00000031982ENSMUST00000034463ENSMUSG00000043068ENSMUST00000055257
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000618_0001ENSG00000173409ENST00000310256ENST00000366658ENST00000435927ENST00000459891ENST00000480519ENSG00000182118ENST00000366654ENST00000466258ENST00000494111ENSG00000227934ENST00000413346ENSG00000252131ENST00000516322CIL_000618_0002ENSMUSG00000031982ENSMUST00000034463ENSMUSG00000043068ENSMUST00000055257
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173409 ENST00000310256 2.886±0.00 5.844±0.00 0.535±0.00 6.996±2.43 4.564±0.00 0.819±0.00 4.739±2.39 7.509±0.00 2.597±0.59 3.174±0.00 0.903±0.00 4.807±2.35 3.225±0.53 15.007±1.16
ENST00000366658 1.525±0.00 N/A 1.696±0.00 2.830±0.11 3.961±0.00 4.746±0.31 0.535±0.00 4.514±1.06 4.184±0.00 2.823±0.00 2.025±0.00 N/A 1.476±0.00 N/A
ENST00000435927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 1.307±0.00 N/A N/A N/A
ENST00000450711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459891 N/A 1.789±0.00 N/A N/A N/A N/A N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A
ENST00000480519 0.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182118 ENST00000366654 39.028±0.00 9.161±0.00 N/A 3.746±2.07 19.314±17.74 3.948±2.38 2.481±2.15 5.091±4.18 2.557±1.33 11.289±8.20 0.744±0.00 3.776±2.37 48.991±13.29 4.326±1.84
ENST00000466258 N/A N/A 0.556±0.00 N/A N/A 0.685±0.00 N/A N/A 0.924±0.00 N/A 3.499±0.00 0.534±0.00 N/A N/A
ENST00000494111 N/A N/A 0.629±0.00 0.298±0.00 N/A N/A N/A N/A 0.663±0.00 N/A N/A N/A N/A N/A
ENSG00000227934 ENST00000413346 N/A 0.030±0.00 N/A 0.187±0.00 0.278±0.00 0.212±0.00 N/A N/A N/A N/A 0.026±0.00 0.175±0.04 0.426±0.21 0.090±0.00
ENSG00000252131 ENST00000516322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.213±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031982 ENSMUST00000034463 N/A N/A 2.677±0.00 1.257±0.00 N/A N/A N/A N/A 1.913±0.95 N/A 0.494±0.12 2.688±0.00 2.693±1.42 2.699±1.18
ENSMUSG00000043068 ENSMUST00000055257 2.004±0.76 1.478±0.38 N/A 0.717±0.22 1.341±0.39 0.933±0.27 0.886±0.42 N/A 8.949±7.54 1.958±0.44 0.637±0.23 N/A 24.290±15.16 2.758±0.43

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