C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00061N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197579-ENSG00000165264 CGP 9606 9:32540544-32573184
GeneTranscriptPositionBiotype
ENSG00000165264 (NDUFB6)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa
ENST00000350021 (NDUFB6-002) 32553651-32573159 protein_coding
ENST00000366466 (NDUFB6-201) 32553533-32573184 protein_coding
ENST00000379847 (NDUFB6-001) 32552999-32573162 protein_coding
ENSG00000197579 (TOPORS)
topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
ENST00000360538 (TOPORS-001) 32540544-32552553 protein_coding
ENST00000379858 (TOPORS-002) 32540826-32552553 protein_coding
CIL_00061N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036822-ENSMUSG00000071014 CGP 10090 4:40259601-40279421
GeneTranscriptPositionBiotype
ENSMUSG00000028407 (Toporsos)
topoisomerase I binding, arginine/serine-rich, opposite strand
ENSMUST00000129758 (Toporsos-001) 40269569-40270940 antisense
ENSMUSG00000036822 (Topors)
topoisomerase I binding, arginine/serine-rich
ENSMUST00000042575 (Topors-001) 40259601-40269850 protein_coding
ENSMUSG00000071014 (Ndufb6)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6
ENSMUST00000095128 (Ndufb6-001) 40270591-40279421 protein_coding
ENSMUST00000108108 (Ndufb6-002) 40270665-40279409 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061N_0001ENSG00000165264ENST00000350021ENST00000366466ENST00000379847ENSG00000197579ENST00000360538ENST00000379858CIL_00061N_0002ENSMUSG00000028407ENSMUST00000129758ENSMUSG00000036822ENSMUST00000042575ENSMUSG00000071014ENSMUST00000095128ENSMUST00000108108
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061N_0001ENSG00000165264ENST00000350021ENST00000366466ENST00000379847ENSG00000197579ENST00000360538ENST00000379858CIL_00061N_0002ENSMUSG00000028407ENSMUST00000129758ENSMUSG00000036822ENSMUST00000042575ENSMUSG00000071014ENSMUST00000095128ENSMUST00000108108
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165264 ENST00000350021 N/A 11.075±0.00 N/A 16.948±0.00 N/A N/A N/A N/A N/A N/A 9.707±0.00 N/A 9.352±1.99 28.073±0.00
ENST00000366466 6.097±0.00 6.814±0.00 N/A N/A 11.300±0.00 7.100±0.00 20.298±0.00 8.355±0.00 5.888±0.00 N/A N/A N/A N/A 15.159±0.00
ENST00000379847 N/A N/A N/A 5.341±1.42 N/A N/A 6.387±4.87 7.489±0.00 3.773±0.00 3.381±0.00 3.071±1.61 10.068±1.94 11.156±1.37 N/A
ENSG00000197579 ENST00000360538 1.885±0.00 2.242±0.00 N/A 1.789±0.09 2.141±0.19 N/A 0.419±0.00 2.488±0.00 1.891±0.97 2.713±0.21 0.472±0.32 3.033±1.12 1.549±0.34 5.202±0.00
ENST00000379858 2.578±0.00 1.847±0.00 3.524±0.00 3.457±0.00 3.103±0.96 3.537±0.56 1.033±0.00 3.941±0.48 1.749±0.77 2.368±0.78 1.270±0.86 3.546±1.51 4.139±3.05 7.403±2.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028407 ENSMUST00000129758 13.644±1.40 45.511±4.81 9.942±0.00 N/A 22.778±3.62 22.461±7.17 N/A 19.763±4.86 25.597±1.96 18.339±6.89 N/A 36.083±7.35 N/A N/A
ENSMUSG00000036822 ENSMUST00000042575 3.690±1.08 6.741±0.64 7.035±0.56 6.231±0.29 3.765±0.89 3.569±0.39 N/A 3.495±0.25 4.905±2.12 4.699±0.11 2.612±0.15 7.506±5.01 15.294±5.97 15.154±22.15
ENSMUSG00000071014 ENSMUST00000095128 71.015±10.96 64.604±10.86 71.439±5.75 40.273±23.68 78.180±9.15 76.997±14.49 191.937±21.77 153.016±14.60 73.092±12.84 41.706±3.92 133.569±11.87 54.681±5.56 58.762±11.40 35.408±1.57
ENSMUST00000108108 N/A 30.765±6.31 N/A 22.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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