C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031483-ENSDARG00000059843 CGP 7955 13:39679469-39788391
GeneTranscriptPositionBiotype
ENSDARG00000031483 (col9a1)
collagen, type IX, alpha 1 		ENSDART00000045434 (col9a1-201) 39680149-39711577 protein_coding
ENSDART00000131508 (col9a1-001) 39679469-39719819 protein_coding
ENSDARG00000059843 (fam135a)
family with sequence similarity 135, member A 		ENSDART00000083641 (fam135a-201) 39748746-39788373 protein_coding
ENSDART00000131434 (fam135a-001) 39742108-39788391 protein_coding
ENSDART00000147971 (fam135a-002) 39768551-39774826 protein_coding
CIL_00061Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112280-ENSG00000082269 CGP 9606 6:70215061-70561174
GeneTranscriptPositionBiotype
ENSG00000082269 (FAM135A)
family with sequence similarity 135, member A 		ENST00000194672 (FAM135A-007) 70426528-70561171 nonsense_mediated_decay
ENST00000361499 (FAM135A-006) 70413578-70560659 protein_coding
ENST00000370479 (FAM135A-201) 70426439-70561170 protein_coding
ENST00000393299 (FAM135A-002) 70428386-70524608 retained_intron
ENST00000418814 (FAM135A-001) 70413308-70561174 protein_coding
ENST00000425415 (FAM135A-003) 70482133-70504960 retained_intron
ENST00000457062 (FAM135A-005) 70413566-70561024 protein_coding
ENST00000505675 (FAM135A-010) 70556698-70561171 retained_intron
ENST00000505769 (FAM135A-004) 70413421-70561032 protein_coding
ENST00000505868 (FAM135A-008) 70428343-70557694 protein_coding
ENST00000507049 (FAM135A-015) 70535907-70538346 retained_intron
ENST00000507085 (FAM135A-013) 70413550-70452565 protein_coding
ENST00000508844 (FAM135A-012) 70413514-70426771 processed_transcript
ENST00000514185 (FAM135A-011) 70412941-70428344 processed_transcript
ENST00000515280 (FAM135A-014) 70413515-70452507 protein_coding
ENST00000515323 (FAM135A-009) 70413425-70524599 protein_coding
ENSG00000112280 (COL9A1)
collagen, type IX, alpha 1 		ENST00000320755 (COL9A1-002) 70216032-70283209 protein_coding
ENST00000357250 (COL9A1-001) 70215061-70303083 protein_coding
ENST00000360859 (COL9A1-010) 70240715-70258642 processed_transcript
ENST00000370496 (COL9A1-004) 70279762-70303070 protein_coding
ENST00000447041 (COL9A1-007) 70234560-70254758 processed_transcript
ENST00000470652 (COL9A1-003) 70274012-70275178 retained_intron
ENST00000486080 (COL9A1-008) 70216524-70246303 processed_transcript
ENST00000489611 (COL9A1-009) 70216743-70280477 processed_transcript
ENST00000489861 (COL9A1-006) 70252166-70254611 retained_intron
ENST00000493682 (COL9A1-005) 70234909-70261078 retained_intron
ENSG00000237643 (RP11-462G2.1)
 ENST00000418403 (RP11-462G2.1-001) 70394887-70399417 lincRNA
ENSG00000253809 (RP1-149L1.1)
 ENST00000522264 (RP1-149L1.1-001) 70222758-70242156 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061Y_0001ENSDARG00000031483ENSDART00000045434ENSDART00000131508ENSDARG00000059843ENSDART00000083641ENSDART00000131434ENSDART00000147971CIL_00061Y_0002ENSG00000082269ENST00000194672ENST00000361499ENST00000370479ENST00000393299ENST00000418814ENST00000425415ENST00000457062ENST00000505675ENST00000505769ENST00000505868ENST00000507049ENST00000507085ENST00000508844ENST00000514185ENST00000515280ENST00000515323ENSG00000112280ENST00000320755ENST00000357250ENST00000360859ENST00000370496ENST00000447041ENST00000470652ENST00000486080ENST00000489611ENST00000489861ENST00000493682ENSG00000237643ENST00000418403ENSG00000253809ENST00000522264
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061Y_0001ENSDARG00000031483ENSDART00000045434ENSDART00000131508ENSDARG00000059843ENSDART00000083641ENSDART00000131434CIL_00061Y_0002ENSG00000082269ENST00000194672ENST00000361499ENST00000370479ENST00000393299ENST00000418814ENST00000425415ENST00000457062ENST00000505675ENST00000505769ENST00000505868ENST00000508844ENSG00000112280ENST00000320755ENST00000357250ENST00000360859ENST00000370496ENST00000447041ENST00000486080ENST00000489611ENSG00000237643ENST00000418403ENSG00000253809ENST00000522264
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031483 ENSDART00000045434 N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 0.017±0.00 N/A 0.057±0.00 N/A N/A N/A
ENSDART00000131508 N/A N/A N/A 0.403±0.32 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059843 ENSDART00000083641 N/A N/A N/A 1.607±1.30 N/A N/A 1.329±0.42 0.555±0.09 0.354±0.00 N/A N/A N/A N/A N/A
ENSDART00000131434 N/A N/A N/A 5.487±2.20 N/A N/A 2.034±1.11 2.379±0.00 0.122±0.00 N/A 1.637±0.00 N/A N/A N/A
ENSDART00000147971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082269 ENST00000194672 1.243±0.00 N/A N/A 0.592±0.00 N/A 0.402±0.00 0.544±0.00 1.356±0.00 0.258±0.00 N/A 0.513±0.00 1.718±0.72 0.315±0.04 1.676±0.04
ENST00000361499 N/A N/A 1.324±0.00 3.055±0.00 N/A 2.191±0.00 0.724±0.33 N/A 1.234±0.00 2.113±0.00 N/A 2.986±1.58 0.249±0.00 1.552±0.00
ENST00000370479 N/A N/A N/A 1.536±0.00 N/A N/A 0.468±0.00 N/A N/A N/A 0.134±0.00 N/A 0.223±0.00 1.624±0.00
ENST00000393299 N/A N/A N/A N/A N/A N/A 1.515±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418814 0.381±0.00 N/A N/A 0.376±0.00 N/A 1.134±0.86 0.343±0.00 N/A N/A 0.291±0.00 0.217±0.00 0.750±0.00 N/A N/A
ENST00000425415 N/A N/A 1.182±0.00 N/A 3.769±0.00 4.202±0.00 0.697±0.00 N/A N/A N/A N/A 7.755±0.00 N/A N/A
ENST00000457062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.637±0.00 0.277±0.00 1.345±0.00
ENST00000505675 N/A 0.902±0.00 N/A 1.263±0.00 1.446±0.00 1.140±0.00 N/A 3.509±0.00 0.552±0.00 N/A N/A 2.374±1.09 0.480±0.16 2.646±0.00
ENST00000505769 N/A N/A N/A N/A N/A 0.403±0.00 N/A 1.066±0.00 0.189±0.00 0.690±0.00 N/A N/A N/A N/A
ENST00000505868 N/A 0.394±0.00 N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000507049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.192±0.00 N/A N/A N/A
ENST00000514185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000112280 ENST00000320755 0.011±0.00 N/A 0.049±0.00 0.989±0.00 0.104±0.00 0.190±0.00 0.078±0.00 N/A N/A N/A N/A 1.201±1.57 N/A 0.538±0.21
ENST00000357250 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENST00000360859 N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 0.398±0.00 N/A 0.392±0.00 0.100±0.00 N/A
ENST00000370496 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.03 N/A N/A N/A N/A
ENST00000447041 N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A
ENST00000470652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486080 0.094±0.00 0.175±0.00 N/A N/A 0.071±0.00 0.144±0.00 0.032±0.00 0.130±0.00 N/A N/A 0.069±0.00 0.068±0.02 N/A 0.193±0.00
ENST00000489611 N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A 0.021±0.00 0.088±0.00 N/A N/A 0.113±0.00 0.536±0.29
ENST00000489861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237643 ENST00000418403 N/A 0.214±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A 2.429±0.00 N/A 0.636±0.36 1.402±1.22 N/A
ENSG00000253809 ENST00000522264 N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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