C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type IX, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486080 COL9A1-008 ENSG00000112280 9606 - 6:70216524-70246303 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyMuscleOvaryTestisENST00000486080
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000486080 0.094±0.00 0.175±0.00 0.071±0.00 0.144±0.00 0.032±0.00 0.130±0.00 0.069±0.00 0.068±0.02 0.193±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061Y CIL_00061Y_0002 CGP 6:70215061-70561174

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088349 Col9a1-002 protein_coding Mus_musculus 0 891
ENSMUST00000054588 Col9a1-001 protein_coding Mus_musculus 0 891
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000006 64

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