C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000638_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055996-ENSDARG00000078455 CGP 7955 2:26646616-26657227
GeneTranscriptPositionBiotype
ENSDARG00000055996 (rps8a)
ribosomal protein S8a 		ENSDART00000078412 (rps8a-001) 26646616-26650038 protein_coding
ENSDART00000131292 (rps8a-002) 26646701-26649476 retained_intron
ENSDART00000136937 (rps8a-005) 26646731-26649445 processed_transcript
ENSDART00000141010 (rps8a-003) 26646704-26649464 processed_transcript
ENSDART00000146173 (rps8a-006) 26649057-26649817 retained_intron
ENSDART00000148010 (rps8a-004) 26646732-26649475 processed_transcript
ENSDARG00000078455 (best4)
bestrophin 4 		ENSDART00000139169 (best4-001) 26653139-26657227 protein_coding
CIL_000638_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142937-ENSG00000142959 CGP 9606 1:44775251-44787705
GeneTranscriptPositionBiotype
ENSG00000142959 (BEST4)
bestrophin 4 		ENST00000372207 (BEST4-001) 44783585-44787705 protein_coding
ENSG00000200913 (SNORD46)
small nucleolar RNA, C/D box 46 		ENST00000364043 (SNORD46-201) 44776490-44776593 snoRNA
ENSG00000234093 (RPS15AP11)
ribosomal protein S15a pseudogene 11 		ENST00000594193 (RPS15AP11-001) 44780331-44780715 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000638_0001ENSDARG00000055996ENSDART00000078412ENSDART00000131292ENSDART00000136937ENSDART00000141010ENSDART00000146173ENSDART00000148010ENSDARG00000078455ENSDART00000139169CIL_000638_0002ENSG00000142959ENST00000372207ENSG00000200913ENST00000364043ENSG00000234093ENST00000594193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000638_0001ENSDARG00000055996ENSDART00000078412ENSDART00000136937ENSDARG00000078455ENSDART00000139169CIL_000638_0002ENSG00000142959ENST00000372207ENSG00000200913ENST00000364043ENSG00000234093ENST00000594193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055996 ENSDART00000078412 N/A N/A N/A 86.918±59.38 N/A N/A 790.520±230.51 1191.060±0.00 426.470±0.00 N/A 469.224±0.00 N/A N/A N/A
ENSDART00000131292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136937 N/A N/A N/A 106.201±11.08 N/A N/A 657.541±0.00 N/A 239.062±0.00 N/A 350.427±0.00 N/A N/A N/A
ENSDART00000141010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078455 ENSDART00000139169 N/A N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142959 ENST00000372207 0.033±0.00 0.544±0.00 N/A 0.403±0.00 0.187±0.00 0.371±0.00 0.111±0.00 0.123±0.00 0.096±0.00 N/A N/A 0.441±0.39 0.116±0.02 0.689±0.26
ENSG00000200913 ENST00000364043 1.332±0.00 1.882±0.00 N/A 75.479±75.19 223.393±0.00 1.017±0.00 141.898±0.00 35.254±0.00 297.418±296.15 3.998±0.00 N/A 1.213±0.00 N/A 0.414±0.16
ENSG00000234093 ENST00000594193 0.039±0.00 0.753±0.00 N/A N/A 0.127±0.00 0.155±0.00 0.217±0.00 N/A 0.184±0.00 0.118±0.00 0.071±0.00 0.305±0.00 0.082±0.00 0.150±0.00

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