C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15a pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594193 RPS15AP11-001 ENSG00000234093 9606 - 1:44780331-44780715 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000594193
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000594193 0.039±0.00 0.753±0.00 0.127±0.00 0.155±0.00 0.217±0.00 0.184±0.00 0.118±0.00 0.071±0.00 0.305±0.00 0.082±0.00 0.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0001 VISTA 1:44224152-44825477
CIL_000638 CIL_000638_0002 CGP 1:44775251-44787705

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087473 Rps15a-ps2-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000071120 Rps15a-ps1-001 processed_pseudogene Mus_musculus 0 353
ENSDART00000128613 rps15a-001 protein_coding Danio_rerio 0 348
ENSMUST00000190805 RP23-386K20.3-001 processed_pseudogene Mus_musculus 0 322
ENSDART00000018822 rps15a-002 retained_intron Danio_rerio 5e-32 141

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