C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000659_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008829-ENSDARG00000013056 CGP 7955 20:27049808-27115750
GeneTranscriptPositionBiotype
ENSDARG00000008829 (chga)
chromogranin A 		ENSDART00000016014 (chga-001) 27049808-27075598 protein_coding
ENSDART00000062078 (chga-201) 27049825-27075597 protein_coding
ENSDART00000126919 (chga-002) 27049808-27069241 protein_coding
ENSDARG00000013056 (itpk1)
inositol 1,3,4-triphosphate 5/6 kinase 		ENSDART00000008590 (itpk1-001) 27079130-27115750 protein_coding
CIL_000659_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100604-ENSG00000100605 CGP 9606 14:92923080-93116320
GeneTranscriptPositionBiotype
ENSG00000100604 (CHGA)
chromogranin A (parathyroid secretory protein 1) 		ENST00000216492 (CHGA-001) 92923080-92935293 protein_coding
ENST00000334654 (CHGA-003) 92923176-92935253 protein_coding
ENST00000553866 (CHGA-005) 92923363-92932268 processed_transcript
ENST00000556076 (CHGA-004) 92923157-92931681 nonsense_mediated_decay
ENST00000556098 (CHGA-006) 92926101-92927589 retained_intron
ENST00000556876 (CHGA-007) 92931677-92933255 retained_intron
ENSG00000100605 (ITPK1)
inositol-tetrakisphosphate 1-kinase 		ENST00000267615 (ITPK1-001) 92936914-93115803 protein_coding
ENST00000354313 (ITPK1-002) 92936914-93115918 protein_coding
ENST00000553452 (ITPK1-007) 92962355-93115822 protein_coding
ENST00000553655 (ITPK1-011) 92962832-93036974 processed_transcript
ENST00000553695 (ITPK1-013) 92946459-92998939 processed_transcript
ENST00000554999 (ITPK1-008) 92958201-93115286 protein_coding
ENST00000555495 (ITPK1-005) 92939862-93115279 protein_coding
ENST00000555553 (ITPK1-010) 92958271-93115272 protein_coding
ENST00000556185 (ITPK1-009) 92958234-93066358 processed_transcript
ENST00000556603 (ITPK1-003) 92939753-93115871 protein_coding
ENST00000556954 (ITPK1-012) 92946331-93036880 processed_transcript
ENST00000557309 (ITPK1-006) 92962355-93116320 protein_coding
ENSG00000258730 (ITPK1-AS1)
ITPK1 antisense RNA 1 		ENST00000553639 (ITPK1-AS1-001) 93067452-93072152 antisense
CIL_000659_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021194-ENSMUSG00000057963 CGP 10090 12:102554969-102704930
GeneTranscriptPositionBiotype
ENSMUSG00000021194 (Chga)
chromogranin A 		ENSMUST00000021610 (Chga-201) 102554969-102565027 protein_coding
ENSMUSG00000057963 (Itpk1)
inositol 1,3,4-triphosphate 5/6 kinase 		ENSMUST00000046518 (Itpk1-001) 102568582-102704930 protein_coding
ENSMUST00000178697 (Itpk1-003) 102623373-102704914 protein_coding
ENSMUST00000179210 (Itpk1-002) 102588506-102695802 protein_coding
ENSMUST00000179417 (Itpk1-004) 102584287-102594077 processed_transcript
ENSMUST00000191320 (Itpk1-005) 102587909-102640934 protein_coding
ENSMUSG00000095174 (Gm20069)
predicted gene, 20069 		ENSMUST00000178938 (Gm20069-001) 102612680-102618516 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000659_0001ENSDARG00000008829ENSDART00000016014ENSDART00000062078ENSDART00000126919ENSDARG00000013056ENSDART00000008590CIL_000659_0002ENSG00000100604ENST00000216492ENST00000334654ENST00000553866ENST00000556076ENST00000556098ENST00000556876ENSG00000100605ENST00000267615ENST00000354313ENST00000553452ENST00000553655ENST00000553695ENST00000554999ENST00000555495ENST00000555553ENST00000556185ENST00000556603ENST00000556954ENST00000557309ENSG00000258730ENST00000553639CIL_000659_0003ENSMUSG00000021194ENSMUST00000021610ENSMUSG00000057963ENSMUST00000046518ENSMUST00000178697ENSMUST00000179210ENSMUST00000179417ENSMUST00000191320ENSMUSG00000095174ENSMUST00000178938
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000659_0001ENSDARG00000008829ENSDART00000016014ENSDART00000062078ENSDART00000126919ENSDARG00000013056ENSDART00000008590CIL_000659_0002ENSG00000100604ENST00000216492ENST00000334654ENST00000553866ENST00000556076ENST00000556098ENST00000556876ENSG00000100605ENST00000267615ENST00000553452ENST00000555495ENST00000555553ENST00000556603ENSG00000258730ENST00000553639CIL_000659_0003ENSMUSG00000021194ENSMUST00000021610ENSMUSG00000057963ENSMUST00000046518ENSMUSG00000095174ENSMUST00000178938
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008829 ENSDART00000016014 N/A N/A N/A 59.829±47.65 N/A N/A 0.026±0.00 0.062±0.00 N/A N/A 2.217±0.00 N/A N/A N/A
ENSDART00000062078 N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A 1.537±0.00 N/A N/A N/A
ENSDART00000126919 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000013056 ENSDART00000008590 N/A N/A N/A 0.148±0.00 N/A N/A 0.699±0.28 11.123±4.88 0.066±0.00 N/A 0.197±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100604 ENST00000216492 0.291±0.00 N/A N/A 66.531±48.55 0.045±0.00 7.437±0.00 N/A N/A N/A N/A N/A 1.164±0.40 0.078±0.01 35.035±21.03
ENST00000334654 N/A N/A N/A 30.426±26.23 0.119±0.01 3.568±0.47 N/A 0.175±0.00 N/A 0.379±0.00 0.106±0.00 0.564±0.15 N/A 16.269±10.56
ENST00000553866 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A 0.158±0.00 N/A
ENST00000556076 N/A N/A N/A N/A 0.143±0.00 N/A 0.065±0.00 N/A 0.113±0.00 N/A 0.065±0.00 N/A N/A N/A
ENST00000556098 N/A 0.180±0.00 N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556876 N/A 0.115±0.00 N/A N/A N/A N/A 0.071±0.00 N/A 0.065±0.00 N/A N/A 0.330±0.00 0.109±0.00 N/A
ENSG00000100605 ENST00000267615 N/A N/A N/A N/A N/A N/A 0.143±0.00 0.411±0.00 0.370±0.00 N/A N/A N/A N/A N/A
ENST00000354313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553452 N/A N/A 2.128±0.00 N/A 3.092±0.00 N/A 1.491±0.00 N/A 3.476±0.00 N/A 4.294±0.00 4.683±3.10 10.077±0.00 14.694±0.00
ENST00000553655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555495 26.925±0.00 12.622±0.00 0.840±0.00 15.204±9.74 54.030±0.00 7.574±5.95 7.605±5.88 8.523±7.21 5.836±3.84 8.354±6.03 17.736±0.00 8.749±0.32 10.033±2.38 16.757±1.93
ENST00000555553 N/A N/A N/A N/A N/A 3.205±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556603 17.879±0.00 11.205±0.00 0.944±0.00 36.837±26.89 20.465±17.47 12.381±10.18 7.334±6.87 7.376±5.91 4.538±3.06 3.730±2.87 7.826±5.87 15.354±12.48 9.776±1.06 24.449±0.00
ENST00000556954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258730 ENST00000553639 0.021±0.00 N/A N/A 0.071±0.00 0.029±0.00 N/A N/A 0.077±0.00 0.018±0.00 N/A N/A 0.020±0.01 0.054±0.00 0.044±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021194 ENSMUST00000021610 0.096±0.06 996.885±221.39 0.129±0.03 68.712±69.34 0.060±0.02 46.175±10.67 0.045±0.02 0.228±0.12 0.472±0.45 0.209±0.09 0.061±0.03 0.703±0.17 0.256±0.17 4.656±0.90
ENSMUSG00000057963 ENSMUST00000046518 24.107±3.80 8.365±2.47 29.797±3.54 14.029±1.10 14.147±5.06 48.903±11.11 4.870±0.64 11.404±1.26 6.076±2.51 11.531±1.55 3.035±0.76 11.829±3.75 27.994±22.28 17.975±0.00
ENSMUST00000178697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095174 ENSMUST00000178938 0.109±0.04 0.422±0.09 0.018±0.00 0.034±0.00 0.904±0.32 0.116±0.01 N/A 0.161±0.10 0.053±0.06 0.308±0.14 0.115±0.00 0.176±0.06 0.036±0.00 0.102±0.04

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