C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromogranin A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021194 Chga 10090 + 12:102554969-102565027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021610 Chga-201 102554969-102565027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021610 0.096±0.06 996.885±221.39 0.129±0.03 68.712±69.34 0.060±0.02 46.175±10.67 0.045±0.02 0.228±0.12 0.472±0.45 0.209±0.09 0.061±0.03 0.703±0.17 0.256±0.17 4.656±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000534 CIL_000534_0002 CGP 12:102469134-102565027
CIL_000659 CIL_000659_0003 CGP 12:102554969-102704930

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0016020 IEA membrane
GO:0030141 IEA secretory granule
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008829 chga chromogranin A protein_coding Danio_rerio
ENSG00000100604 CHGA chromogranin A (parathyroid secretory protein 1) protein_coding Homo_sapiens

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