C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000270316-ENSG00000214435 CGP 9606 10:102854272-102901899
GeneTranscriptPositionBiotype
ENSG00000166275 (C10orf32)
chromosome 10 open reading frame 32 		ENST00000339834 (C10orf32-001) 102854223-102864961 protein_coding
ENST00000369883 (C10orf32-002) 102854262-102864213 protein_coding
ENST00000478833 (C10orf32-003) 102854409-102860827 retained_intron
ENSG00000201080 (RNU6-372P)
RNA, U6 small nuclear 372, pseudogene 		ENST00000364210 (RNU6-372P-201) 102868421-102868519 snRNA
ENSG00000214435 (AS3MT)
arsenite methyltransferase 		ENST00000369880 (AS3MT-001) 102869516-102901899 protein_coding
ENST00000615257 (AS3MT-201) 102869516-102901894 protein_coding
ENSG00000235266 (RP11-753C18.8)
 ENST00000438729 (RP11-753C18.8-001) 102887874-102888188 processed_pseudogene
ENSG00000270316 (C10orf32-ASMT)
C10orf32-ASMT readthrough (NMD candidate) 		ENST00000299353 (C10orf32-ASMT-001) 102854272-102901899 nonsense_mediated_decay
CIL_00065V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062376-ENSMUSG00000003559 CGP 10090 19:46689906-46741095
GeneTranscriptPositionBiotype
ENSMUSG00000003559 (As3mt)
arsenic (+3 oxidation state) methyltransferase 		ENSMUST00000003655 (As3mt-201) 46707443-46741095 protein_coding
ENSMUSG00000062376 (2010012O05Rik)
RIKEN cDNA 2010012O05 gene 		ENSMUST00000074912 (2010012O05Rik-201) 46689906-46703382 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065V_0001ENSG00000166275ENST00000339834ENST00000369883ENST00000478833ENSG00000201080ENST00000364210ENSG00000214435ENST00000369880ENST00000615257ENSG00000235266ENST00000438729ENSG00000270316ENST00000299353CIL_00065V_0002ENSMUSG00000003559ENSMUST00000003655ENSMUSG00000062376ENSMUST00000074912
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065V_0001ENSG00000166275ENST00000339834ENST00000369883ENSG00000201080ENST00000364210ENSG00000214435ENST00000369880ENST00000615257ENSG00000235266ENST00000438729ENSG00000270316ENST00000299353CIL_00065V_0002ENSMUSG00000003559ENSMUST00000003655ENSMUSG00000062376ENSMUST00000074912
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166275 ENST00000339834 2.832±0.00 6.543±0.00 2.100±0.00 4.596±0.77 4.169±1.57 2.887±1.30 1.854±1.31 5.911±2.25 5.078±4.40 4.199±2.53 1.602±0.05 3.801±1.82 4.396±0.60 5.234±1.03
ENST00000369883 4.270±0.00 7.601±0.00 N/A 9.284±0.00 7.485±0.00 N/A 4.019±0.00 6.435±0.00 8.237±0.00 7.489±0.00 1.540±0.00 5.917±1.28 6.793±0.12 8.992±0.48
ENST00000478833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201080 ENST00000364210 N/A 1.513±0.00 N/A N/A 0.250±0.00 N/A N/A N/A 0.712±0.00 N/A N/A N/A N/A N/A
ENSG00000214435 ENST00000369880 N/A 1.936±0.00 N/A 1.748±0.00 2.142±1.75 N/A 2.098±1.23 2.932±2.14 10.524±0.00 N/A 1.108±0.00 2.149±0.00 N/A 2.368±1.18
ENST00000615257 N/A N/A 3.020±0.00 3.466±1.01 2.510±1.62 2.719±1.40 4.029±1.42 4.589±0.00 3.624±1.80 1.627±0.00 0.437±0.00 4.146±3.40 N/A 3.616±1.11
ENSG00000235266 ENST00000438729 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.069±0.00 0.130±0.00
ENSG00000270316 ENST00000299353 0.983±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.542±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003559 ENSMUST00000003655 4.605±0.73 10.644±2.11 9.373±0.91 3.211±1.53 3.450±1.05 7.370±1.57 12.402±1.10 19.939±2.89 11.460±5.89 6.373±1.16 12.001±1.53 8.465±5.72 21.184±6.29 4.381±1.22
ENSMUSG00000062376 ENSMUST00000074912 5.618±0.94 3.861±0.46 5.578±0.19 3.423±1.66 3.818±0.25 2.132±0.54 2.680±0.24 3.438±0.25 2.922±0.48 2.437±0.69 3.658±0.27 4.416±1.48 2.055±1.15 1.879±1.05

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