C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 6, regulatory subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064099 Ppp6r1-201 ENSMUSG00000052296 10090 - 7:4631501-4658950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064099 38.527±7.90 45.740±5.01 32.416±0.78 31.329±11.70 42.822±12.65 55.119±5.17 24.187±3.18 42.589±4.58 30.898±5.16 45.055±3.07 17.976±1.81 39.792±9.66 25.190±11.35 44.380±23.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068Y CIL_00068Y_0002 CGP 7:4628042-4658950
CIL_0004K3 CIL_0004K3_0002 CGP 7:4631501-4684963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0019903 ISA protein phosphatase binding
GO:0043666 ISA regulation of phosphoprotein phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000412770 PPP6R1-001 protein_coding Homo_sapiens 0 2412
ENST00000587283 PPP6R1-002 protein_coding Homo_sapiens 0 2250
ENST00000587457 PPP6R1-008 retained_intron Homo_sapiens 0 414
ENST00000589343 PPP6R1-005 retained_intron Homo_sapiens 0 250
ENST00000591323 PPP6R1-004 retained_intron Homo_sapiens 0 686

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