C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin domain containing 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281741 TXNDC16-001 ENSG00000087301 9606 - 14:52430590-52552506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281741
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281741 0.878±0.00 0.456±0.00 2.522±0.67 1.309±0.33 1.755±0.15 0.570±0.00 0.386±0.00 0.282±0.19 1.265±0.32 0.428±0.01 1.488±0.49 0.733±0.38 2.203±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069O CIL_00069O_0002 CGP 14:52314305-52552522
CIL_00069R CIL_00069R_0002 CGP 14:52430590-52637713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005788 IDA endoplasmic reticulum lumen
GO:0008150 ND biological_process
GO:0045454 IEA cell redox homeostasis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123879 Txndc16-002 protein_coding Mus_musculus 0 1965
ENSMUST00000139526 Txndc16-001 protein_coding Mus_musculus 0 1965
ENSMUST00000022377 Txndc16-003 protein_coding Mus_musculus 0 1951
ENSMUST00000128484 Txndc16-006 retained_intron Mus_musculus 0 771
ENSMUST00000147853 Txndc16-005 retained_intron Mus_musculus 0 771
ENSMUST00000156600 Txndc16-010 retained_intron Mus_musculus 0 285

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