C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163291-ENSG00000156269 CGP 9606 4:78887127-79326050
GeneTranscriptPositionBiotype
ENSG00000138756 (BMP2K)
BMP2 inducible kinase 		ENST00000335016 (BMP2K-201) 78776378-78912185 protein_coding
ENST00000389010 (BMP2K-002) 78776342-78879435 nonsense_mediated_decay
ENST00000502613 (BMP2K-003) 78859624-78916372 protein_coding
ENST00000502871 (BMP2K-001) 78776378-78879969 protein_coding
ENST00000505725 (BMP2K-005) 78850892-78865773 retained_intron
ENST00000507670 (BMP2K-004) 78872328-78879432 retained_intron
ENST00000515075 (BMP2K-006) 78859167-78861469 retained_intron
ENSG00000156269 (NAA11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit 		ENST00000286794 (NAA11-001) 79316653-79326050 protein_coding
ENST00000511542 (NAA11-002) 79225694-79325523 nonsense_mediated_decay
ENST00000513733 (NAA11-003) 79225980-79325468 processed_transcript
ENSG00000242175 (RN7SL127P)
RNA, 7SL, cytoplasmic 127, pseudogene 		ENST00000494856 (RN7SL127P-201) 78898855-78899154 misc_RNA
ENSG00000249307 (LINC01088)
long intergenic non-protein coding RNA 1088 		ENST00000437737 (LINC01088-010) 79211681-79245532 antisense
ENST00000505149 (LINC01088-006) 79305123-79308798 antisense
ENST00000507476 (LINC01088-005) 79195837-79308755 antisense
ENST00000507761 (LINC01088-008) 79195836-79227956 antisense
ENST00000509088 (LINC01088-001) 78971748-79308544 antisense
ENST00000510667 (LINC01088-004) 78971748-79308472 antisense
ENST00000511241 (LINC01088-007) 79258781-79308654 antisense
ENST00000511895 (LINC01088-009) 79211685-79227886 antisense
ENST00000512130 (LINC01088-003) 79197541-79308655 antisense
ENST00000513153 (LINC01088-002) 79085239-79308653 antisense
ENST00000515597 (LINC01088-011) 79195834-79299565 antisense
CIL_00069Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055725-ENSMUSG00000046000 CGP 10090 5:97082329-97392330
GeneTranscriptPositionBiotype
ENSMUSG00000034663 (Bmp2k)
BMP2 inducible kinase 		ENSMUST00000035635 (Bmp2k-001) 96997689-97091867 protein_coding
ENSMUST00000112974 (Bmp2k-002) 96997689-97069649 protein_coding
ENSMUSG00000046000 (Naa11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit 		ENSMUST00000060265 (Naa11-201) 97382224-97392330 protein_coding
ENSMUSG00000055725 (Paqr3)
progestin and adipoQ receptor family member III 		ENSMUST00000069453 (Paqr3-001) 97082329-97111596 protein_coding
ENSMUST00000112968 (Paqr3-003) 97102142-97111596 protein_coding
ENSMUST00000112969 (Paqr3-004) 97086980-97111573 protein_coding
ENSMUST00000126585 (Paqr3-005) 97095932-97097771 retained_intron
ENSMUST00000132127 (Paqr3-002) 97104580-97111584 retained_intron
ENSMUSG00000067161 (Gm5560)
predicted pseudogene 5560 		ENSMUST00000086918 (Gm5560-001) 97264828-97265719 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069Z_0001ENSG00000138756ENST00000335016ENST00000389010ENST00000502613ENST00000502871ENST00000505725ENST00000507670ENST00000515075ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000242175ENST00000494856ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511241ENST00000511895ENST00000512130ENST00000513153ENST00000515597CIL_00069Z_0002ENSMUSG00000034663ENSMUST00000035635ENSMUST00000112974ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000055725ENSMUST00000069453ENSMUST00000112968ENSMUST00000112969ENSMUST00000126585ENSMUST00000132127ENSMUSG00000067161ENSMUST00000086918
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069Z_0001ENSG00000138756ENST00000335016ENST00000389010ENST00000507670ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000242175ENST00000494856ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511895ENST00000512130ENST00000513153ENST00000515597CIL_00069Z_0002ENSMUSG00000034663ENSMUST00000035635ENSMUST00000112974ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000055725ENSMUST00000069453ENSMUST00000112969ENSMUSG00000067161ENSMUST00000086918
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138756 ENST00000335016 N/A N/A 1.118±0.00 2.077±0.00 3.026±0.00 3.390±0.00 0.799±0.00 N/A 1.314±0.00 4.000±0.00 0.381±0.00 1.516±0.00 N/A 7.317±0.00
ENST00000389010 2.025±0.00 5.263±0.00 2.083±0.00 2.659±0.76 N/A 4.589±0.00 1.344±0.00 N/A 1.676±0.10 1.930±0.00 N/A 3.058±0.00 2.952±0.70 N/A
ENST00000502613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507670 N/A N/A N/A N/A N/A N/A N/A 3.019±0.00 N/A N/A 1.613±0.00 N/A N/A N/A
ENST00000515075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156269 ENST00000286794 N/A N/A N/A N/A N/A 0.011±0.00 0.023±0.00 N/A N/A N/A N/A N/A 3.599±0.58 4.303±0.56
ENST00000511542 N/A N/A N/A 0.119±0.00 0.158±0.00 N/A 0.082±0.00 N/A N/A 0.286±0.00 N/A N/A 0.769±0.00 N/A
ENST00000513733 N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242175 ENST00000494856 N/A 0.257±0.00 N/A 0.352±0.00 0.510±0.44 0.693±0.00 N/A 0.132±0.00 N/A 1.589±0.00 N/A N/A N/A N/A
ENSG00000249307 ENST00000437737 0.956±0.00 1.768±0.00 N/A N/A 0.575±0.41 N/A N/A 0.928±0.00 0.208±0.00 1.028±0.00 N/A 0.647±0.00 N/A 1.678±0.00
ENST00000505149 N/A N/A N/A 1.431±1.08 N/A 1.422±0.00 N/A N/A N/A 0.237±0.00 N/A N/A 0.383±0.00 0.690±0.00
ENST00000507476 N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A
ENST00000507761 0.282±0.00 N/A 0.050±0.00 N/A 0.372±0.04 N/A 0.271±0.16 0.028±0.00 N/A 0.281±0.00 N/A N/A N/A 1.879±0.00
ENST00000509088 0.388±0.00 0.756±0.00 N/A 1.543±1.06 N/A 1.279±0.00 0.280±0.00 1.434±0.00 N/A 0.325±0.00 N/A 0.333±0.12 0.678±0.24 1.925±0.14
ENST00000510667 N/A N/A N/A N/A 0.533±0.00 1.742±0.00 0.421±0.00 1.402±0.00 0.045±0.00 0.269±0.00 1.451±0.00 0.642±0.15 0.351±0.12 N/A
ENST00000511241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511895 N/A 0.913±0.00 N/A 1.074±0.00 N/A 0.256±0.00 N/A 0.342±0.21 0.064±0.00 0.184±0.00 N/A N/A N/A 0.566±0.00
ENST00000512130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.580±0.00 N/A 0.189±0.00 N/A
ENST00000513153 N/A N/A N/A 1.775±0.00 0.131±0.00 1.411±0.00 0.395±0.00 N/A N/A N/A N/A 0.866±0.67 0.121±0.00 1.487±0.59
ENST00000515597 N/A N/A N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034663 ENSMUST00000035635 2.686±1.02 1.136±0.04 1.462±0.56 0.773±0.00 2.285±0.63 1.049±0.18 0.523±0.07 1.713±0.19 3.076±2.31 1.823±0.29 1.031±0.33 3.943±1.68 2.907±0.64 0.708±0.00
ENSMUST00000112974 5.477±2.13 12.316±1.20 1.756±0.22 3.951±2.22 12.111±5.29 6.749±0.64 0.938±0.25 6.300±1.02 5.442±4.56 8.940±0.58 0.398±0.00 26.199±13.62 3.175±1.03 14.154±7.60
ENSMUSG00000046000 ENSMUST00000060265 0.012±0.00 N/A N/A 0.008±0.00 N/A 0.027±0.00 0.010±0.00 0.019±0.01 0.015±0.00 0.014±0.00 0.014±0.00 0.425±0.25 0.196±0.11 5.402±2.06
ENSMUSG00000055725 ENSMUST00000069453 N/A 5.114±0.00 N/A N/A N/A N/A N/A N/A 2.666±0.69 N/A N/A N/A N/A N/A
ENSMUST00000112968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112969 4.381±1.76 6.238±0.81 6.042±0.76 8.036±3.46 6.253±1.70 2.953±0.31 1.661±0.21 3.565±0.54 3.501±1.21 5.449±1.82 1.887±0.38 11.748±2.67 3.702±0.23 5.779±0.50
ENSMUST00000126585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067161 ENSMUST00000086918 1.349±0.59 0.238±0.12 0.035±0.01 0.093±0.08 0.983±0.24 2.058±1.12 0.657±0.30 1.751±0.98 0.143±0.14 0.652±0.04 N/A 1.551±0.94 0.017±0.00 0.079±0.04

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