C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5560
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086918 Gm5560-001 ENSMUSG00000067161 10090 + 5:97264828-97265719 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000086918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000086918 1.349±0.59 0.238±0.12 0.035±0.01 0.093±0.08 0.983±0.24 2.058±1.12 0.657±0.30 1.751±0.98 0.143±0.14 0.652±0.04 1.551±0.94 0.017±0.00 0.079±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Z CIL_00069Z_0002 CGP 5:97082329-97392330
CIL_0007LC CIL_0007LC_0002 UCNEbase 5:97148425-97885285
CIL_000920 CIL_000920_0002 VISTA 5:97242961-97843765
CIL_0007XK CIL_0007XK_0002 VISTA 5:97246822-97847439

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000105726 slc25a5-001 protein_coding Danio_rerio 0 745
ENSDART00000133990 slc25a5-003 protein_coding Danio_rerio 0 268
ENSDART00000122534 slc25a43-201 protein_coding Danio_rerio 5e-40 169
ENST00000317881 SLC25A5-001 protein_coding Homo_sapiens 0 1199
ENST00000406156 SLC25A5P7-001 processed_pseudogene Homo_sapiens 0 833
ENST00000413713 SLC25A5P2-001 processed_pseudogene Homo_sapiens 0 994
ENST00000418448 SLC25A5P4-001 processed_pseudogene Homo_sapiens 0 704
ENST00000422717 SLC25A5P8-001 processed_pseudogene Homo_sapiens 0 905
ENST00000435239 SLC25A5P5-001 processed_pseudogene Homo_sapiens 0 1044
ENST00000444439 SLC25A5P3-001 processed_pseudogene Homo_sapiens 0 994
ENST00000450250 SLC25A5P1-001 processed_pseudogene Homo_sapiens 0 961
ENST00000460013 SLC25A5-003 processed_transcript Homo_sapiens 0 905
ENST00000461730 WBP2NL-005 processed_transcript Homo_sapiens 0 239
ENST00000463551 SLC25A5-002 processed_transcript Homo_sapiens 0 363
ENST00000475354 SLC25A5-004 processed_transcript Homo_sapiens 0 575
ENST00000515328 SLC25A5P6-001 processed_pseudogene Homo_sapiens 0 922
ENST00000610725 RP1-232L24.4-001 processed_pseudogene Homo_sapiens 0 966

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