C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042509-ENSDARG00000016543 CGP 7955 15:15197790-15211223
GeneTranscriptPositionBiotype
ENSDARG00000016543 (rnmtl1a)
RNA methyltransferase like 1a 		ENSDART00000147900 (rnmtl1a-001) 15204133-15211223 protein_coding
ENSDARG00000042509 (glod4)
glyoxalase domain containing 4 		ENSDART00000062335 (glod4-001) 15197790-15202598 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006AM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167699-ENSG00000171861 CGP 9606 17:757097-792509
GeneTranscriptPositionBiotype
ENSG00000167699 (GLOD4)
glyoxalase domain containing 4 		ENST00000301328 (GLOD4-005) 759330-782279 protein_coding
ENST00000301329 (GLOD4-001) 759097-782341 protein_coding
ENST00000536578 (GLOD4-201) 759310-783390 protein_coding
ENST00000571073 (GLOD4-002) 759323-777692 retained_intron
ENST00000572220 (GLOD4-016) 771451-782276 nonsense_mediated_decay
ENST00000573137 (GLOD4-007) 760073-771404 protein_coding
ENST00000574354 (GLOD4-012) 778302-782280 retained_intron
ENST00000574554 (GLOD4-004) 760022-782267 nonsense_mediated_decay
ENST00000574581 (GLOD4-017) 770429-782255 nonsense_mediated_decay
ENST00000575528 (GLOD4-009) 760064-771379 nonsense_mediated_decay
ENST00000575790 (GLOD4-014) 770044-782291 nonsense_mediated_decay
ENST00000575800 (GLOD4-010) 757097-760161 processed_transcript
ENST00000575851 (GLOD4-015) 760098-782280 nonsense_mediated_decay
ENST00000576239 (GLOD4-003) 759452-782294 retained_intron
ENST00000576419 (GLOD4-008) 760188-782279 protein_coding
ENST00000576670 (GLOD4-011) 776881-782193 nonsense_mediated_decay
ENST00000576750 (GLOD4-013) 778423-782280 retained_intron
ENSG00000171861 (RNMTL1)
RNA methyltransferase like 1 		ENST00000304478 (RNMTL1-001) 782273-792509 protein_coding
ENST00000571157 (RNMTL1-003) 782600-788198 protein_coding
ENST00000574509 (RNMTL1-004) 782367-791766 nonsense_mediated_decay
ENST00000574916 (RNMTL1-002) 782358-783517 retained_intron
ENSG00000262228 (RP11-676J12.4)
 ENST00000358446 (RP11-676J12.4-201) 763565-765319 pseudogene
ENST00000570809 (RP11-676J12.4-001) 763565-765319 lincRNA
ENSG00000262434 (RP11-676J12.8)
 ENST00000574560 (RP11-676J12.8-001) 789744-790525 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AM_0001ENSDARG00000016543ENSDART00000147900ENSDARG00000042509ENSDART00000062335CIL_0006AM_0002ENSG00000167699ENST00000301328ENST00000301329ENST00000536578ENST00000571073ENST00000572220ENST00000573137ENST00000574354ENST00000574554ENST00000574581ENST00000575528ENST00000575790ENST00000575800ENST00000575851ENST00000576239ENST00000576419ENST00000576670ENST00000576750ENSG00000171861ENST00000304478ENST00000571157ENST00000574509ENST00000574916ENSG00000262228ENST00000358446ENST00000570809ENSG00000262434ENST00000574560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AM_0001ENSDARG00000016543ENSDART00000147900ENSDARG00000042509ENSDART00000062335CIL_0006AM_0002ENSG00000167699ENST00000301328ENST00000301329ENST00000536578ENST00000571073ENST00000574554ENST00000575528ENST00000575851ENST00000576239ENST00000576419ENSG00000171861ENST00000304478ENST00000574509ENST00000574916ENSG00000262228ENST00000358446ENST00000570809ENSG00000262434ENST00000574560
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016543 ENSDART00000147900 N/A N/A N/A 1.633±0.05 N/A N/A 1.447±0.18 2.246±1.64 1.240±0.00 N/A 0.571±0.00 N/A N/A N/A
ENSDARG00000042509 ENSDART00000062335 N/A N/A N/A 6.264±5.02 N/A N/A 9.397±2.10 5.033±2.79 0.472±0.00 N/A 4.500±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167699 ENST00000301328 5.913±0.00 18.913±0.00 N/A 18.885±0.00 N/A 13.098±0.00 6.724±0.00 16.081±0.00 11.414±0.00 7.817±0.00 5.097±0.00 13.219±2.89 20.302±2.82 11.767±1.64
ENST00000301329 N/A N/A 1.306±0.00 5.991±0.00 N/A 3.055±0.00 1.096±0.00 4.939±0.00 3.808±0.00 3.131±0.00 N/A 4.146±0.00 10.941±0.00 N/A
ENST00000536578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.102±0.00 N/A 5.902±0.00
ENST00000571073 N/A N/A 1.030±0.00 N/A 3.017±0.00 1.538±0.00 N/A N/A 1.390±0.00 N/A 2.601±0.00 2.591±0.00 N/A N/A
ENST00000572220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.151±0.00 N/A N/A
ENST00000574581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.589±0.00 24.274±0.00 N/A
ENST00000575790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575851 5.700±0.00 13.145±0.00 N/A N/A 10.077±0.00 N/A N/A 5.326±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576239 N/A N/A 0.564±0.00 N/A 1.123±0.00 1.408±0.00 N/A N/A N/A 1.019±0.00 N/A N/A N/A N/A
ENST00000576419 N/A N/A 4.738±0.00 5.907±0.00 8.440±0.00 N/A 2.883±0.00 3.910±0.00 5.300±0.00 5.996±0.00 N/A 12.449±6.74 14.318±3.33 N/A
ENST00000576670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171861 ENST00000304478 5.590±0.00 N/A N/A N/A 11.118±0.00 5.231±2.51 5.419±4.20 9.922±0.00 5.892±4.44 5.635±0.00 8.755±0.00 7.837±4.50 9.170±1.30 16.910±0.20
ENST00000571157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.104±0.00 N/A N/A N/A
ENST00000574916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.554±0.00 N/A N/A N/A
ENSG00000262228 ENST00000358446 N/A N/A 0.056±0.00 N/A 0.610±0.00 0.079±0.00 0.091±0.07 0.149±0.00 N/A 0.062±0.00 0.078±0.00 0.143±0.00 0.041±0.02 N/A
ENST00000570809 0.301±0.00 0.857±0.00 N/A 0.229±0.00 0.253±0.00 0.175±0.00 N/A 0.438±0.00 0.113±0.00 0.317±0.00 0.048±0.00 0.188±0.01 N/A 0.638±0.38
ENSG00000262434 ENST00000574560 0.073±0.00 0.132±0.00 N/A N/A 0.202±0.00 0.036±0.00 0.108±0.07 0.198±0.00 N/A 0.369±0.00 N/A 0.277±0.18 0.138±0.01 0.262±0.11

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