C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA methyltransferase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304478 RNMTL1-001 ENSG00000171861 9606 + 17:782273-792509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304478
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304478 5.590±0.00 11.118±0.00 5.231±2.51 5.419±4.20 9.922±0.00 5.892±4.44 5.635±0.00 8.755±0.00 7.837±4.50 9.170±1.30 16.910±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AM CIL_0006AM_0002 CGP 17:757097-792509
CIL_0006AF CIL_0006AF_0002 CGP 17:782273-979770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0003723 IEA RNA binding
GO:0005739 IEA mitochondrion
GO:0006396 IEA RNA processing
GO:0008168 IEA methyltransferase activity
GO:0008173 IEA RNA methyltransferase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040577 Rnmtl1-001 protein_coding Mus_musculus 0 1249
ENSMUST00000125463 Rnmtl1-002 retained_intron Mus_musculus 0 542
ENSMUST00000155526 Rnmtl1-003 processed_transcript Mus_musculus 0 477

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