C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107262-ENSG00000086065 CGP 9606 9:33247820-33282069
GeneTranscriptPositionBiotype
ENSG00000086065 (CHMP5)
charged multivesicular body protein 5 		ENST00000223500 (CHMP5-001) 33264942-33281539 protein_coding
ENST00000419016 (CHMP5-201) 33264879-33282069 protein_coding
ENST00000487080 (CHMP5-002) 33277793-33280951 processed_transcript
ENSG00000107262 (BAG1)
BCL2-associated athanogene 		ENST00000379701 (BAG1-003) 33255025-33260441 retained_intron
ENST00000379704 (BAG1-001) 33255078-33264763 protein_coding
ENST00000379707 (BAG1-007) 33255049-33264677 nonsense_mediated_decay
ENST00000467389 (BAG1-008) 33255025-33260488 processed_transcript
ENST00000468274 (BAG1-009) 33255864-33257671 retained_intron
ENST00000472232 (BAG1-201) 33252477-33264761 protein_coding
ENST00000473464 (BAG1-005) 33257720-33259032 processed_transcript
ENST00000473781 (BAG1-011) 33258919-33264559 protein_coding
ENST00000488499 (BAG1-010) 33262741-33264670 protein_coding
ENST00000493917 (BAG1-006) 33247820-33256806 processed_transcript
ENSG00000122711 (SPINK4)
serine peptidase inhibitor, Kazal type 4 		ENST00000379721 (SPINK4-001) 33240164-33248567 protein_coding
ENST00000379725 (SPINK4-002) 33218365-33248552 protein_coding
CIL_0006AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028416-ENSMUSG00000028419 CGP 10090 4:40936398-40965303
GeneTranscriptPositionBiotype
ENSMUSG00000028416 (Bag1)
BCL2-associated athanogene 1 		ENSMUST00000030125 (Bag1-002) 40936401-40948243 protein_coding
ENSMUST00000108089 (Bag1-001) 40936398-40948281 protein_coding
ENSMUST00000189377 (Bag1-201) 40936399-40948294 protein_coding
ENSMUST00000191273 (Bag1-202) 40936399-40948294 protein_coding
ENSMUSG00000028419 (Chmp5)
charged multivesicular body protein 5 		ENSMUST00000030128 (Chmp5-001) 40948407-40965303 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AX_0001ENSG00000086065ENST00000223500ENST00000419016ENST00000487080ENSG00000107262ENST00000379701ENST00000379704ENST00000379707ENST00000467389ENST00000468274ENST00000472232ENST00000473464ENST00000473781ENST00000488499ENST00000493917ENSG00000122711ENST00000379721ENST00000379725CIL_0006AX_0002ENSMUSG00000028416ENSMUST00000030125ENSMUST00000108089ENSMUST00000189377ENSMUST00000191273ENSMUSG00000028419ENSMUST00000030128
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AX_0001ENSG00000086065ENST00000223500ENSG00000107262ENST00000379701ENST00000379704ENST00000379707ENST00000472232ENST00000473781ENSG00000122711ENST00000379721CIL_0006AX_0002ENSMUSG00000028416ENSMUST00000030125ENSMUST00000108089ENSMUST00000191273ENSMUSG00000028419ENSMUST00000030128
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086065 ENST00000223500 20.882±0.00 20.697±0.00 6.703±0.00 31.286±2.70 18.093±5.85 18.641±14.65 10.181±4.53 21.898±10.75 10.160±1.34 26.210±11.57 6.892±3.11 20.558±6.97 26.906±2.94 26.097±7.57
ENST00000419016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107262 ENST00000379701 N/A N/A 1.019±0.00 N/A N/A N/A N/A N/A 2.158±0.00 N/A N/A N/A N/A N/A
ENST00000379704 44.081±0.00 32.371±0.00 4.249±0.00 31.059±21.21 23.156±20.18 38.974±35.17 32.342±28.04 47.174±36.35 16.308±7.76 38.663±34.71 47.903±30.26 31.335±17.44 44.391±6.30 72.840±5.12
ENST00000379707 12.853±0.00 14.388±0.00 N/A N/A 10.390±8.13 N/A 9.988±0.00 N/A N/A N/A 13.104±0.00 3.327±2.30 N/A 27.756±2.01
ENST00000467389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472232 N/A 1.910±0.00 0.925±0.00 0.728±0.00 1.994±0.00 0.717±0.00 N/A 3.794±0.00 1.043±0.07 1.896±1.17 0.989±0.00 3.616±2.38 3.054±1.50 N/A
ENST00000473464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473781 N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000122711 ENST00000379721 N/A N/A N/A 0.164±0.00 51.511±0.00 20.360±5.00 N/A N/A 0.461±0.00 N/A N/A 1.822±1.10 N/A N/A
ENST00000379725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028416 ENSMUST00000030125 N/A 118.479±25.40 N/A 76.551±0.00 22.482±0.00 N/A N/A N/A 12.624±6.96 N/A 68.029±7.69 126.498±24.52 95.398±17.48 458.300±0.00
ENSMUST00000108089 51.755±14.97 201.657±211.59 45.669±0.94 N/A 107.668±52.44 118.012±45.32 26.920±7.03 71.766±29.38 31.056±9.37 76.520±27.98 13.315±3.94 111.182±73.92 32.514±1.71 N/A
ENSMUST00000189377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191273 14.914±6.09 40.215±12.77 15.654±0.07 33.248±14.60 54.849±17.40 57.297±25.81 25.726±11.01 27.059±9.54 12.681±8.40 30.255±10.53 N/A 121.525±59.18 18.497±5.00 161.468±9.39
ENSMUSG00000028419 ENSMUST00000030128 16.546±2.38 7.449±0.74 50.832±7.25 41.858±5.12 9.269±3.52 15.935±2.13 9.101±0.38 25.816±4.41 18.077±6.54 13.444±5.60 11.481±0.77 14.207±14.39 38.644±12.18 15.286±2.05

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