C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000223500 CHMP5-001 ENSG00000086065 9606 + 9:33264942-33281539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223500 20.882±0.00 20.697±0.00 6.703±0.00 31.286±2.70 18.093±5.85 18.641±14.65 10.181±4.53 21.898±10.75 10.160±1.34 26.210±11.57 6.892±3.11 20.558±6.97 26.906±2.94 26.097±7.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AX CIL_0006AX_0001 CGP 9:33247820-33282069
CIL_0006AW CIL_0006AW_0001 CGP 9:33264879-33371157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001919 IEA regulation of receptor recycling
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 IEA endosome
GO:0005829 TAS cytosol
GO:0007034 IEA vacuolar transport
GO:0007040 IEA lysosome organization
GO:0008333 IEA endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030128 Chmp5-001 protein_coding Mus_musculus 0 1240

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