C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030128 Chmp5-001 ENSMUSG00000028419 10090 + 4:40948407-40965303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030128 16.546±2.38 7.449±0.74 50.832±7.25 41.858±5.12 9.269±3.52 15.935±2.13 9.101±0.38 25.816±4.41 18.077±6.54 13.444±5.60 11.481±0.77 14.207±14.39 38.644±12.18 15.286±2.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AX CIL_0006AX_0002 CGP 4:40936398-40965303
CIL_0006AW CIL_0006AW_0002 CGP 4:40948407-41025993

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001919 IMP regulation of receptor recycling
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005768 IEA endosome
GO:0007040 IMP lysosome organization
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223500 CHMP5-001 protein_coding Homo_sapiens 0 1240
ENST00000399931 RP11-198M15.1-001 processed_pseudogene Homo_sapiens 0 702
ENST00000419016 CHMP5-201 protein_coding Homo_sapiens 0 645

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