C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040180-ENSDARG00000032277 CGP 7955 20:2697857-2742357
GeneTranscriptPositionBiotype
ENSDARG00000032277 (rars2)
arginyl-tRNA synthetase 2, mitochondrial (putative) 		ENSDART00000104606 (rars2-001) 2711159-2742357 protein_coding
ENSDART00000138753 (rars2-002) 2729362-2742287 protein_coding
ENSDART00000152721 (rars2-003) 2718715-2737287 nonsense_mediated_decay
CIL_0006BQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164414-ENSG00000146282 CGP 9606 6:87470623-87590003
GeneTranscriptPositionBiotype
ENSG00000146282 (RARS2)
arginyl-tRNA synthetase 2, mitochondrial 		ENST00000369536 (RARS2-001) 87514378-87590003 protein_coding
ENST00000451155 (RARS2-004) 87545616-87569590 protein_coding
ENST00000493269 (RARS2-002) 87514407-87516880 processed_transcript
ENST00000497828 (RARS2-003) 87518476-87519231 processed_transcript
ENSG00000164414 (SLC35A1)
solute carrier family 35 (CMP-sialic acid transporter), member A1 		ENST00000369552 (SLC35A1-001) 87472977-87512336 protein_coding
ENST00000369556 (SLC35A1-201) 87472925-87512330 protein_coding
ENST00000369557 (SLC35A1-202) 87472925-87512330 protein_coding
ENST00000464978 (SLC35A1-002) 87470623-87511803 processed_transcript
ENST00000544441 (SLC35A1-203) 87473004-87511526 protein_coding
ENST00000622775 (SLC35A1-204) 87472925-87512330 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BQ_0001ENSDARG00000032277ENSDART00000104606ENSDART00000138753ENSDART00000152721CIL_0006BQ_0002ENSG00000146282ENST00000369536ENST00000451155ENST00000493269ENST00000497828ENSG00000164414ENST00000369552ENST00000369556ENST00000369557ENST00000464978ENST00000544441ENST00000622775
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BQ_0001ENSDARG00000032277ENSDART00000104606ENSDART00000138753CIL_0006BQ_0002ENSG00000146282ENST00000369536ENSG00000164414ENST00000369552ENST00000369556ENST00000369557ENST00000622775
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032277 ENSDART00000104606 N/A N/A N/A 2.525±0.00 N/A N/A 0.899±0.30 1.690±0.26 0.430±0.00 N/A 0.966±0.00 N/A N/A N/A
ENSDART00000138753 N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000152721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146282 ENST00000369536 14.526±0.00 10.908±0.00 N/A 4.380±3.53 7.984±6.94 6.482±2.10 6.292±0.00 6.969±4.09 3.114±0.98 7.445±0.00 8.875±0.00 10.490±4.84 15.453±5.06 30.758±9.38
ENST00000451155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164414 ENST00000369552 3.797±0.00 2.534±0.00 1.313±0.00 2.319±0.18 4.232±0.03 6.271±1.22 1.459±0.89 4.513±1.78 2.573±0.25 7.258±1.07 0.954±0.00 6.365±3.20 4.730±0.54 11.102±0.00
ENST00000369556 N/A 1.665±0.00 N/A 1.822±0.00 N/A 1.992±0.00 1.450±0.00 4.814±0.00 N/A N/A 0.536±0.00 4.793±0.00 N/A N/A
ENST00000369557 N/A 1.217±0.00 N/A 1.393±0.00 N/A N/A 0.217±0.00 N/A 1.560±0.00 N/A 0.729±0.30 N/A N/A N/A
ENST00000464978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622775 N/A N/A N/A N/A N/A N/A N/A N/A 1.231±0.00 N/A N/A N/A N/A N/A

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