C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100479-ENSG00000197776 CGP 9606 14:49643555-49753152
GeneTranscriptPositionBiotype
ENSG00000100479 (POLE2)
polymerase (DNA directed), epsilon 2, accessory subunit 		ENST00000216367 (POLE2-001) 49643560-49688303 protein_coding
ENST00000539565 (POLE2-002) 49643585-49688422 protein_coding
ENST00000553805 (POLE2-008) 49679474-49688203 protein_coding
ENST00000553850 (POLE2-004) 49653925-49654463 retained_intron
ENST00000554377 (POLE2-011) 49650119-49654320 retained_intron
ENST00000554396 (POLE2-012) 49650188-49688210 protein_coding
ENST00000554671 (POLE2-007) 49643564-49647360 processed_transcript
ENST00000554851 (POLE2-005) 49643555-49651484 retained_intron
ENST00000555724 (POLE2-006) 49643564-49647360 processed_transcript
ENST00000556584 (POLE2-003) 49643586-49688197 processed_transcript
ENST00000556937 (POLE2-010) 49643555-49655064 processed_transcript
ENSG00000197776 (KLHDC1)
kelch domain containing 1 		ENST00000359332 (KLHDC1-001) 49693105-49753152 protein_coding
ENST00000553274 (KLHDC1-004) 49693120-49729007 protein_coding
ENST00000554512 (KLHDC1-006) 49725608-49751106 processed_transcript
ENST00000555704 (KLHDC1-002) 49693105-49751852 nonsense_mediated_decay
ENST00000556392 (KLHDC1-003) 49693105-49751847 nonsense_mediated_decay
ENST00000557128 (KLHDC1-005) 49693129-49740177 protein_coding
ENSG00000258400 (RP11-831F12.2)
 ENST00000557160 (RP11-831F12.2-001) 49707667-49708792 antisense
ENSG00000259155 (RP11-831F12.3)
 ENST00000554632 (RP11-831F12.3-001) 49677369-49677893 processed_pseudogene
CIL_0006BX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020974-ENSMUSG00000051890 CGP 10090 12:69201779-69284632
GeneTranscriptPositionBiotype
ENSMUSG00000020974 (Pole2)
polymerase (DNA directed), epsilon 2 (p59 subunit) 		ENSMUST00000021359 (Pole2-201) 69201779-69228190 protein_coding
ENSMUSG00000051890 (Klhdc1)
kelch domain containing 1 		ENSMUST00000063445 (Klhdc1-001) 69241832-69284632 protein_coding
ENSMUST00000127791 (Klhdc1-003) 69241914-69242642 processed_transcript
ENSMUST00000146389 (Klhdc1-002) 69241176-69242640 processed_transcript
ENSMUST00000173419 (Klhdc1-004) 69241918-69283319 nonsense_mediated_decay
ENSMUSG00000085539 (Gm15561)
predicted gene 15561 		ENSMUST00000124326 (Gm15561-001) 69267771-69273432 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BX_0001ENSG00000100479ENST00000216367ENST00000539565ENST00000553805ENST00000553850ENST00000554377ENST00000554396ENST00000554671ENST00000554851ENST00000555724ENST00000556584ENST00000556937ENSG00000197776ENST00000359332ENST00000553274ENST00000554512ENST00000555704ENST00000556392ENST00000557128ENSG00000258400ENST00000557160ENSG00000259155ENST00000554632CIL_0006BX_0002ENSMUSG00000020974ENSMUST00000021359ENSMUSG00000051890ENSMUST00000063445ENSMUST00000127791ENSMUST00000146389ENSMUST00000173419ENSMUSG00000085539ENSMUST00000124326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BX_0001ENSG00000100479ENST00000216367ENST00000539565ENST00000553850ENST00000554377ENST00000554396ENST00000554671ENST00000554851ENST00000556584ENST00000556937ENSG00000197776ENST00000359332ENST00000553274ENST00000554512ENST00000555704ENST00000556392ENST00000557128ENSG00000258400ENST00000557160ENSG00000259155ENST00000554632CIL_0006BX_0002ENSMUSG00000020974ENSMUST00000021359ENSMUSG00000051890ENSMUST00000063445ENSMUST00000127791ENSMUST00000173419ENSMUSG00000085539ENSMUST00000124326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100479 ENST00000216367 N/A N/A N/A N/A N/A 1.230±0.00 N/A N/A N/A N/A N/A 0.979±0.81 0.593±0.33 2.120±0.00
ENST00000539565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A 1.082±0.00
ENST00000553805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553850 N/A N/A N/A N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554377 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554396 0.075±0.00 0.781±0.00 N/A 0.146±0.01 0.362±0.00 0.056±0.00 0.133±0.08 0.289±0.00 0.293±0.23 0.297±0.00 N/A 1.374±0.61 0.768±0.00 N/A
ENST00000554671 N/A N/A N/A N/A N/A N/A 0.168±0.00 0.471±0.00 N/A 0.189±0.00 N/A N/A N/A N/A
ENST00000554851 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A 0.483±0.00 N/A
ENST00000555724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.63 0.349±0.14 N/A
ENST00000556937 0.068±0.00 N/A N/A 0.244±0.00 N/A 0.398±0.00 N/A N/A 0.781±0.00 0.228±0.00 N/A 1.702±0.74 N/A N/A
ENSG00000197776 ENST00000359332 0.188±0.00 N/A 0.424±0.00 1.742±1.09 0.328±0.04 0.468±0.00 0.873±0.00 0.135±0.00 0.294±0.06 0.450±0.00 1.019±0.00 1.057±0.85 0.297±0.00 0.630±0.14
ENST00000553274 0.921±0.00 N/A N/A N/A N/A 0.636±0.00 N/A N/A N/A 1.118±0.00 N/A N/A N/A N/A
ENST00000554512 N/A N/A N/A N/A N/A 0.932±0.00 N/A N/A 1.937±0.00 4.314±0.00 0.295±0.00 N/A N/A N/A
ENST00000555704 N/A N/A N/A 1.431±0.00 N/A 0.365±0.00 N/A N/A N/A 0.236±0.00 N/A 0.463±0.38 N/A 0.561±0.07
ENST00000556392 N/A N/A 0.856±0.00 1.436±0.00 1.048±0.00 N/A N/A N/A 0.879±0.00 0.769±0.00 N/A N/A 0.152±0.00 0.568±0.00
ENST00000557128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.473±0.00 N/A
ENSG00000258400 ENST00000557160 0.145±0.00 0.179±0.00 N/A 0.103±0.00 0.187±0.00 0.064±0.03 0.104±0.00 0.072±0.00 0.115±0.00 0.106±0.00 N/A N/A N/A 0.085±0.00
ENSG00000259155 ENST00000554632 N/A 0.302±0.00 N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A 0.208±0.12 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020974 ENSMUST00000021359 1.444±0.71 0.783±0.35 2.029±0.60 2.597±2.04 1.575±0.57 1.759±0.47 0.387±0.01 0.971±0.23 11.490±14.92 0.867±0.25 0.184±0.09 2.470±0.85 6.233±4.43 0.989±0.21
ENSMUSG00000051890 ENSMUST00000063445 0.773±0.31 0.777±0.31 1.193±0.21 1.412±0.66 0.496±0.18 0.526±0.22 3.556±0.75 0.890±0.23 0.191±0.18 0.930±0.16 8.682±0.72 0.950±0.65 0.849±0.57 4.631±0.26
ENSMUST00000127791 N/A 4.641±1.42 11.212±0.00 N/A 4.558±2.03 1.316±0.22 N/A 5.928±3.06 2.189±1.49 N/A N/A 1.851±0.00 N/A 67.678±5.28
ENSMUST00000146389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173419 N/A N/A N/A 1.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.16 4.745±0.00
ENSMUSG00000085539 ENSMUST00000124326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.92 N/A 14.121±0.00

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