C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554632 RP11-831F12.3-001 ENSG00000259155 9606 + 14:49677369-49677893 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartOvaryENST00000554632
Transcript ID Adrenal Heart Ovary
ENST00000554632 0.302±0.00 0.153±0.00 0.208±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BX CIL_0006BX_0001 CGP 14:49643555-49753152

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027401 Stk16-001 protein_coding Mus_musculus 0 497
ENSMUST00000135484 Stk16-002 retained_intron Mus_musculus 0 453
ENSMUST00000188460 Stk16-012 protein_coding Mus_musculus 0 448
ENSMUST00000191108 Stk16-011 nonsense_mediated_decay Mus_musculus 0 438
ENSMUST00000131738 Stk16-008 processed_transcript Mus_musculus 0 350
ENSMUST00000189242 Stk16-016 retained_intron Mus_musculus 0 296
ENSMUST00000156012 Stk16-009 retained_intron Mus_musculus 0 285

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