C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006CW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000033508-ENSDARG00000086870 CGP 7955 10:16217569-16292898
GeneTranscriptPositionBiotype
ENSDARG00000033508 (CR396586.1)
Uncharacterized protein 		ENSDART00000041585 (CR396586.1-201) 16217569-16221187 protein_coding
ENSDARG00000086870 (slc12a2)
solute carrier family 12 (potassium/chloride transporters), member 2 		ENSDART00000129844 (slc12a2-001) 16254127-16292898 protein_coding
CIL_0006CW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205279-ENSG00000064651 CGP 9606 5:127649044-128189688
GeneTranscriptPositionBiotype
ENSG00000064651 (SLC12A2)
solute carrier family 12 (sodium/potassium/chloride transporter), member 2 		ENST00000262461 (SLC12A2-001) 128083766-128189688 protein_coding
ENST00000343225 (SLC12A2-004) 128083848-128188442 protein_coding
ENST00000502849 (SLC12A2-007) 128178380-128182921 retained_intron
ENST00000504416 (SLC12A2-002) 128157988-128171095 retained_intron
ENST00000507791 (SLC12A2-006) 128177549-128184507 processed_transcript
ENST00000509205 (SLC12A2-003) 128083791-128187025 nonsense_mediated_decay
ENST00000509616 (SLC12A2-005) 128158049-128171882 retained_intron
ENSG00000205279 (CTXN3)
cortexin 3 		ENST00000379445 (CTXN3-001) 127649044-127658630 protein_coding
ENST00000395322 (CTXN3-002) 127653049-127658630 protein_coding
ENST00000514851 (CTXN3-003) 127653015-127653691 processed_transcript
ENST00000620385 (CTXN3-201) 127657423-127658630 protein_coding
ENSG00000230561 (LINC01183)
long intergenic non-protein coding RNA 1183 		ENST00000506670 (LINC01183-002) 127739538-127740287 lincRNA
ENST00000513708 (LINC01183-003) 127935243-127941507 lincRNA
ENST00000514853 (LINC01183-001) 127703390-127941634 lincRNA
ENSG00000245937 (LINC01184)
long intergenic non-protein coding RNA 1184 		ENST00000499346 (LINC01184-001) 127940426-128083100 lincRNA
ENST00000501173 (LINC01184-006) 127966549-128083075 lincRNA
ENST00000501652 (LINC01184-003) 127965888-128082974 lincRNA
ENST00000501702 (LINC01184-009) 128021528-128083074 lincRNA
ENST00000508353 (LINC01184-005) 127966735-128082881 lincRNA
ENST00000508878 (LINC01184-004) 128024027-128082960 lincRNA
ENST00000512185 (LINC01184-012) 128002695-128003988 lincRNA
ENST00000514409 (LINC01184-002) 127941005-128083028 lincRNA
ENST00000514573 (LINC01184-007) 127966673-128083090 lincRNA
ENST00000606251 (LINC01184-010) 128060584-128083172 lincRNA
ENST00000606855 (LINC01184-011) 128002529-128024160 lincRNA
ENSG00000248799 (CTC-548H10.2)
 ENST00000512352 (CTC-548H10.2-001) 127651693-127664029 antisense
ENSG00000250329 (KDELC1P1)
KDEL (Lys-Asp-Glu-Leu) containing 1 pseudogene 1 		ENST00000512118 (KDELC1P1-001) 128109486-128110994 processed_pseudogene
ENSG00000250603 (CTC-228N24.2)
 ENST00000507509 (CTC-228N24.2-001) 127838486-127857804 lincRNA
ENSG00000251032 (CUL1P1)
cullin 1 pseudogene 1 		ENST00000509510 (CUL1P1-001) 127784618-127787042 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CW_0001ENSDARG00000033508ENSDART00000041585ENSDARG00000086870ENSDART00000129844CIL_0006CW_0002ENSG00000064651ENST00000262461ENST00000343225ENST00000502849ENST00000504416ENST00000507791ENST00000509205ENST00000509616ENSG00000205279ENST00000379445ENST00000395322ENST00000514851ENST00000620385ENSG00000230561ENST00000506670ENST00000513708ENST00000514853ENSG00000245937ENST00000499346ENST00000501173ENST00000501652ENST00000501702ENST00000508353ENST00000508878ENST00000512185ENST00000514409ENST00000514573ENST00000606251ENST00000606855ENSG00000248799ENST00000512352ENSG00000250329ENST00000512118ENSG00000250603ENST00000507509ENSG00000251032ENST00000509510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CW_0001ENSDARG00000033508ENSDART00000041585ENSDARG00000086870ENSDART00000129844CIL_0006CW_0002ENSG00000064651ENST00000262461ENST00000343225ENST00000509205ENSG00000205279ENST00000379445ENST00000395322ENST00000514851ENST00000620385ENSG00000230561ENST00000506670ENST00000514853ENSG00000245937ENST00000499346ENST00000501173ENST00000501652ENST00000501702ENST00000514409ENSG00000248799ENST00000512352ENSG00000250329ENST00000512118ENSG00000250603ENST00000507509ENSG00000251032ENST00000509510
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033508 ENSDART00000041585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.983±0.00 N/A N/A N/A
ENSDARG00000086870 ENSDART00000129844 N/A N/A N/A 15.147±2.09 N/A N/A 1.540±0.22 2.830±0.00 0.178±0.00 N/A 3.018±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064651 ENST00000262461 9.815±0.00 1.817±0.00 1.143±0.00 10.945±0.00 13.760±6.01 11.214±7.77 2.304±1.20 1.580±1.36 2.188±1.42 2.912±1.58 1.464±1.09 12.888±10.00 1.106±0.44 3.280±0.13
ENST00000343225 N/A N/A N/A 2.587±0.00 N/A N/A 0.382±0.00 N/A N/A 1.351±0.00 N/A N/A N/A N/A
ENST00000502849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509205 N/A N/A 0.707±0.00 4.053±0.00 24.463±0.00 13.544±0.00 1.112±0.09 0.272±0.00 N/A 2.507±1.56 1.993±0.00 N/A N/A 5.574±2.26
ENST00000509616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205279 ENST00000379445 N/A 0.019±0.00 N/A 2.444±0.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00
ENST00000395322 N/A N/A 5.204±0.00 N/A 0.111±0.00 N/A N/A 0.355±0.00 N/A N/A N/A 0.018±0.00 N/A 0.053±0.00
ENST00000514851 N/A N/A 2.563±0.00 N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A
ENST00000620385 N/A N/A N/A N/A N/A 0.101±0.00 0.015±0.00 0.137±0.00 N/A N/A 0.204±0.00 N/A N/A 0.044±0.00
ENSG00000230561 ENST00000506670 0.029±0.00 0.031±0.00 N/A 0.033±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00
ENST00000513708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.506±1.00
ENSG00000245937 ENST00000499346 1.761±0.00 3.686±0.00 0.443±0.00 3.511±1.74 3.580±0.00 N/A 2.397±0.00 0.208±0.00 0.863±0.00 1.410±0.00 2.254±0.00 3.692±0.03 1.301±0.07 3.445±0.00
ENST00000501173 N/A N/A N/A N/A N/A N/A N/A N/A 1.215±0.00 N/A N/A N/A N/A N/A
ENST00000501652 1.097±0.00 2.263±0.00 N/A N/A N/A N/A 1.275±0.44 2.423±0.00 N/A 0.887±0.00 0.905±0.00 3.207±0.13 0.943±0.00 N/A
ENST00000501702 1.166±0.00 2.076±0.00 N/A 1.215±0.00 1.990±0.00 1.331±0.71 0.827±0.66 0.964±0.00 0.975±0.33 2.000±1.19 0.546±0.02 2.373±0.88 1.216±0.96 2.679±0.37
ENST00000508353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.217±0.00 N/A N/A N/A
ENST00000514573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248799 ENST00000512352 N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00
ENSG00000250329 ENST00000512118 0.008±0.00 0.039±0.00 N/A 0.027±0.00 1.159±1.08 1.222±0.00 0.074±0.03 N/A 0.178±0.00 0.299±0.24 N/A 0.571±0.72 N/A 0.075±0.01
ENSG00000250603 ENST00000507509 N/A N/A N/A 0.038±0.00 N/A N/A 0.099±0.00 N/A N/A N/A N/A 0.438±0.37 N/A 0.073±0.00
ENSG00000251032 ENST00000509510 N/A 0.004±0.00 0.017±0.00 0.034±0.00 0.105±0.00 0.008±0.00 0.091±0.00 N/A 0.004±0.00 N/A N/A N/A 0.007±0.00 N/A

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