C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148483-ENSG00000260314 CGP 9606 10:17752252-17911170
GeneTranscriptPositionBiotype
ENSG00000148483 (TMEM236)
transmembrane protein 236 		ENST00000377495 (TMEM236-001) 17752252-17800868 protein_coding
ENSG00000207938 (MIR511)
microRNA 511 		ENST00000385203 (MIR511-201) 17845107-17845193 miRNA
ENSG00000235637 (RP11-457D2.3)
 ENST00000442231 (RP11-457D2.3-001) 17862887-17865471 antisense
ENSG00000260314 (MRC1)
mannose receptor, C type 1 		ENST00000569591 (MRC1-001) 17809344-17911170 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0006DM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061531-ENSMUSG00000026712 CGP 10090 2:14174524-14332057
GeneTranscriptPositionBiotype
ENSMUSG00000026712 (Mrc1)
mannose receptor, C type 1 		ENSMUST00000028045 (Mrc1-001) 14229414-14332057 protein_coding
ENSMUST00000146168 (Mrc1-002) 14328561-14330519 processed_transcript
ENSMUSG00000061531 (Tmem236)
transmembrane protein 236 		ENSMUST00000077517 (Tmem236-001) 14174524-14221971 protein_coding
ENSMUSG00000083545 (Gm13320)
predicted gene 13320 		ENSMUST00000120155 (Gm13320-001) 14189609-14189938 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DM_0001ENSG00000148483ENST00000377495ENSG00000207938ENST00000385203ENSG00000235637ENST00000442231ENSG00000260314ENST00000569591CIL_0006DM_0002ENSMUSG00000026712ENSMUST00000028045ENSMUST00000146168ENSMUSG00000061531ENSMUST00000077517ENSMUSG00000083545ENSMUST00000120155
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DM_0001ENSG00000148483ENST00000377495ENSG00000207938ENST00000385203ENSG00000235637ENST00000442231ENSG00000260314ENST00000569591CIL_0006DM_0002ENSMUSG00000026712ENSMUST00000028045ENSMUSG00000061531ENSMUST00000077517ENSMUSG00000083545ENSMUST00000120155
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148483 ENST00000377495 0.259±0.00 0.258±0.00 N/A 0.041±0.03 0.310±0.17 2.051±1.39 0.149±0.02 0.200±0.08 0.170±0.15 0.164±0.07 0.111±0.01 0.048±0.01 0.442±0.10 0.126±0.06
ENSG00000207938 ENST00000385203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.945±0.00 N/A
ENSG00000235637 ENST00000442231 N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A 0.682±0.00 N/A N/A N/A N/A N/A
ENSG00000260314 ENST00000569591 17.012±0.00 10.486±0.00 1.705±0.00 0.800±0.12 6.276±0.54 2.642±0.00 4.598±2.20 6.506±0.30 11.478±0.29 22.945±8.63 0.782±0.40 2.187±1.01 17.436±7.78 3.319±2.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026712 ENSMUST00000028045 6.195±2.65 1.032±0.27 7.073±1.50 0.995±0.42 6.784±1.83 1.398±0.52 1.995±0.15 0.648±0.25 3.028±1.43 5.430±0.64 0.829±0.29 2.395±1.66 2.879±2.41 2.208±0.54
ENSMUST00000146168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061531 ENSMUST00000077517 0.025±0.01 0.067±0.04 0.033±0.01 0.034±0.01 0.029±0.01 17.411±1.97 0.008±0.00 0.029±0.01 0.046±0.02 0.099±0.06 0.036±0.02 0.035±0.03 0.042±0.03 0.269±0.13
ENSMUSG00000083545 ENSMUST00000120155 N/A 0.373±0.00 N/A 2.102±0.00 1.577±0.00 1.774±1.64 N/A 0.298±0.09 0.843±0.46 0.218±0.00 N/A 0.727±0.04 0.273±0.11 0.405±0.18

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