C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannose receptor, C type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028045 Mrc1-001 ENSMUSG00000026712 10090 + 2:14229414-14332057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028045 6.195±2.65 1.032±0.27 7.073±1.50 0.995±0.42 6.784±1.83 1.398±0.52 1.995±0.15 0.648±0.25 3.028±1.43 5.430±0.64 0.829±0.29 2.395±1.66 2.879±2.41 2.208±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DM CIL_0006DM_0002 CGP 2:14174524-14332057
CIL_0005A6 CIL_0005A6_0002 CGP 2:14229414-14494977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 ISS receptor activity
GO:0004888 IDA transmembrane signaling receptor activity
GO:0005515 IEA protein binding
GO:0005537 IDA mannose binding
GO:0005886 ISS plasma membrane
GO:0006898 ISS receptor-mediated endocytosis
GO:0007165 IDA signal transduction
GO:0009986 IDA cell surface
GO:0010008 ISS endosome membrane
GO:0016021 IEA integral component of membrane
GO:0071222 IDA cellular response to lipopolysaccharide
GO:0071346 IDA cellular response to interferon-gamma
GO:0071353 IDA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000569591 MRC1-001 protein_coding Homo_sapiens 0 3964

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