C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035913-ENSDARG00000061804 CGP 7955 19:32130104-32208780
GeneTranscriptPositionBiotype
ENSDARG00000035913 (yars)
tyrosyl-tRNA synthetase 		ENSDART00000052126 (yars-001) 32130104-32140670 protein_coding
ENSDART00000124491 (yars-201) 32130381-32140671 protein_coding
ENSDART00000135484 (yars-006) 32130386-32136767 protein_coding
ENSDART00000137884 (yars-002) 32130710-32136408 processed_transcript
ENSDART00000139599 (yars-005) 32130395-32132338 protein_coding
ENSDART00000140603 (yars-004) 32130358-32136580 protein_coding
ENSDART00000143394 (yars-007) 32130656-32136428 protein_coding
ENSDART00000145423 (yars-003) 32130382-32132649 processed_transcript
ENSDARG00000061804 (si:ch211-194e15.5)
si:ch211-194e15.5 		ENSDART00000088573 (si:ch211-194e15.5-201) 32141804-32208780 protein_coding
ENSDART00000137633 (si:ch211-194e15.5-001) 32142653-32149988 protein_coding
CIL_0006DR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028811-ENSMUSG00000050390 CGP 10090 4:129189760-129261404
GeneTranscriptPositionBiotype
ENSMUSG00000028811 (Yars)
tyrosyl-tRNA synthetase 		ENSMUST00000106054 (Yars-001) 129189760-129219607 protein_coding
ENSMUST00000128287 (Yars-008) 129189902-129197441 retained_intron
ENSMUST00000133992 (Yars-003) 129197115-129210578 nonsense_mediated_decay
ENSMUST00000137591 (Yars-007) 129212696-129218663 processed_transcript
ENSMUST00000140708 (Yars-004) 129197234-129208615 processed_transcript
ENSMUST00000146106 (Yars-005) 129209538-129210852 retained_intron
ENSMUST00000147248 (Yars-006) 129213762-129214934 retained_intron
ENSMUST00000148619 (Yars-002) 129212244-129215726 retained_intron
ENSMUSG00000050390 (C77080)
expressed sequence C77080 		ENSMUST00000052602 (C77080-005) 129219578-129248443 protein_coding
ENSMUST00000097873 (C77080-001) 129219578-129239174 protein_coding
ENSMUST00000106051 (C77080-002) 129219578-129227911 protein_coding
ENSMUST00000145261 (C77080-004) 129225360-129261404 protein_coding
ENSMUST00000146376 (C77080-003) 129225383-129227480 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DR_0001ENSDARG00000035913ENSDART00000052126ENSDART00000124491ENSDART00000135484ENSDART00000137884ENSDART00000139599ENSDART00000140603ENSDART00000143394ENSDART00000145423ENSDARG00000061804ENSDART00000088573ENSDART00000137633CIL_0006DR_0002ENSMUSG00000028811ENSMUST00000106054ENSMUST00000128287ENSMUST00000133992ENSMUST00000137591ENSMUST00000140708ENSMUST00000146106ENSMUST00000147248ENSMUST00000148619ENSMUSG00000050390ENSMUST00000052602ENSMUST00000097873ENSMUST00000106051ENSMUST00000145261ENSMUST00000146376
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DR_0001ENSDARG00000035913ENSDART00000052126ENSDART00000124491ENSDART00000135484ENSDARG00000061804ENSDART00000088573ENSDART00000137633CIL_0006DR_0002ENSMUSG00000028811ENSMUST00000106054ENSMUST00000137591ENSMUST00000148619ENSMUSG00000050390ENSMUST00000052602ENSMUST00000097873ENSMUST00000106051
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035913 ENSDART00000052126 N/A N/A N/A 13.470±3.11 N/A N/A 7.101±2.53 15.093±4.17 3.493±0.00 N/A 6.305±0.00 N/A N/A N/A
ENSDART00000124491 N/A N/A N/A 4.044±0.00 N/A N/A 11.571±0.71 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135484 N/A N/A N/A N/A N/A N/A N/A N/A 1.755±0.00 N/A N/A N/A N/A N/A
ENSDART00000137884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061804 ENSDART00000088573 N/A N/A N/A 3.370±1.23 N/A N/A 0.254±0.11 2.587±0.74 N/A N/A 2.361±0.00 N/A N/A N/A
ENSDART00000137633 N/A N/A N/A 0.582±0.00 N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028811 ENSMUST00000106054 10.306±1.43 8.632±1.78 12.366±0.78 25.660±10.18 8.064±2.31 N/A 5.150±0.36 8.877±0.48 21.589±4.97 8.284±0.05 13.434±2.31 12.465±2.54 28.016±8.19 5.610±0.52
ENSMUST00000128287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137591 N/A N/A N/A 109.235±0.00 N/A N/A N/A N/A N/A N/A N/A 60.729±0.00 87.945±14.45 24.847±0.00
ENSMUST00000140708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148619 N/A N/A N/A N/A 1.835±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050390 ENSMUST00000052602 2.022±0.71 1.421±0.26 10.212±0.68 N/A 2.266±0.37 22.720±3.10 0.881±0.27 4.411±1.23 5.581±1.55 5.638±0.56 N/A 2.665±0.81 8.135±0.74 0.858±0.19
ENSMUST00000097873 2.453±0.00 1.614±0.19 5.258±0.13 2.770±0.85 4.260±0.53 14.235±3.32 N/A 3.615±1.06 1.840±0.00 N/A N/A 3.268±0.70 8.176±3.76 0.619±0.15
ENSMUST00000106051 N/A 3.736±0.00 N/A 3.223±0.24 N/A 30.531±14.81 N/A 2.775±0.33 4.309±1.16 8.186±0.64 N/A 3.982±2.17 N/A N/A
ENSMUST00000145261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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