C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006FG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156384-ENSG00000197748 CGP 9606 10:104122058-104232362
GeneTranscriptPositionBiotype
ENSG00000156384 (SFR1)
SWI5-dependent recombination repair 1
ENST00000369727 (SFR1-002) 104122165-104126385 protein_coding
ENST00000369729 (SFR1-001) 104122058-104126385 protein_coding
ENST00000463224 (SFR1-003) 104122058-104123363 processed_transcript
ENSG00000197748 (CFAP43)
cilia and flagella associated protein 43
ENST00000278064 (CFAP43-003) 104167585-104232362 protein_coding
ENST00000357060 (CFAP43-201) 104129888-104232362 protein_coding
ENST00000369719 (CFAP43-006) 104203430-104232340 protein_coding
ENST00000369720 (CFAP43-005) 104192494-104232305 protein_coding
ENST00000434629 (CFAP43-007) 104129934-104186065 protein_coding
ENST00000457071 (CFAP43-002) 104129889-104161122 protein_coding
ENST00000479392 (CFAP43-004) 104133454-104142315 processed_transcript
CIL_0006FG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025066-ENSMUSG00000044948 CGP 10090 19:47731756-47919299
GeneTranscriptPositionBiotype
ENSMUSG00000025066 (Sfr1)
SWI5 dependent recombination repair 1
ENSMUST00000099353 (Sfr1-201) 47731756-47735588 protein_coding
ENSMUSG00000025068 (Gsto1)
glutathione S-transferase omega 1
ENSMUST00000026050 (Gsto1-001) 47854970-47864790 protein_coding
ENSMUST00000130157 (Gsto1-002) 47855083-47855725 retained_intron
ENSMUST00000143694 (Gsto1-003) 47862995-47864567 retained_intron
ENSMUSG00000025069 (Gsto2)
glutathione S-transferase omega 2
ENSMUST00000056159 (Gsto2-001) 47865767-47886324 protein_coding
ENSMUST00000120645 (Gsto2-002) 47865545-47886324 protein_coding
ENSMUST00000135016 (Gsto2-003) 47870262-47884704 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FG_0001ENSG00000156384ENST00000369727ENST00000369729ENST00000463224ENSG00000197748ENST00000278064ENST00000357060ENST00000369719ENST00000369720ENST00000434629ENST00000457071ENST00000479392CIL_0006FG_0002ENSMUSG00000025066ENSMUST00000099353ENSMUSG00000025068ENSMUST00000026050ENSMUST00000130157ENSMUST00000143694ENSMUSG00000025069ENSMUST00000056159ENSMUST00000120645ENSMUST00000135016
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FG_0001ENSG00000156384ENST00000369727ENST00000369729ENSG00000197748ENST00000278064ENST00000357060ENST00000369719ENST00000369720ENST00000434629ENST00000457071ENST00000479392CIL_0006FG_0002ENSMUSG00000025066ENSMUST00000099353ENSMUSG00000025068ENSMUST00000026050ENSMUST00000143694ENSMUSG00000025069ENSMUST00000056159ENSMUST00000120645ENSMUST00000135016
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156384 ENST00000369727 1.254±0.00 2.379±0.00 0.501±0.00 2.343±0.12 1.405±0.56 1.500±0.55 N/A 0.578±0.00 0.450±0.00 0.280±0.00 0.839±0.83 2.478±1.58 0.563±0.42 2.221±1.56
ENST00000369729 1.184±0.00 N/A N/A N/A 0.850±0.00 N/A 0.836±0.27 1.621±0.00 1.067±0.00 1.439±0.00 0.017±0.00 2.662±0.49 0.525±0.37 3.351±1.10
ENST00000463224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197748 ENST00000278064 0.012±0.00 N/A N/A N/A 0.168±0.00 0.074±0.00 N/A N/A N/A 2.099±0.00 N/A 0.263±0.00 0.029±0.00 N/A
ENST00000357060 N/A N/A N/A 0.179±0.05 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.510±0.42 0.036±0.00 N/A
ENST00000369719 N/A N/A N/A N/A 0.112±0.00 N/A 0.039±0.00 0.468±0.00 N/A N/A N/A 0.640±0.00 0.086±0.00 N/A
ENST00000369720 N/A 0.053±0.00 N/A 0.169±0.00 N/A 0.086±0.00 0.009±0.00 N/A 0.097±0.00 0.952±0.00 N/A 0.196±0.00 N/A N/A
ENST00000434629 N/A 0.043±0.00 N/A 0.158±0.00 N/A 0.032±0.01 0.008±0.00 N/A 0.021±0.01 0.809±0.00 N/A 0.533±0.16 0.017±0.01 13.912±4.78
ENST00000457071 0.037±0.00 N/A N/A 0.150±0.00 N/A N/A 0.041±0.00 0.015±0.00 0.061±0.00 1.699±0.00 N/A 1.700±1.55 0.020±0.00 N/A
ENST00000479392 N/A 0.084±0.00 N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025066 ENSMUST00000099353 39.440±18.65 44.297±4.04 31.623±2.78 50.327±16.73 46.690±13.47 27.300±3.19 26.876±10.01 26.978±10.20 21.917±8.39 28.775±11.86 17.498±6.55 56.790±25.57 49.294±27.65 26.042±5.90
ENSMUSG00000025068 ENSMUST00000026050 78.487±33.20 30.870±2.39 218.169±22.44 20.517±5.47 29.067±4.77 125.982±5.06 63.989±12.54 42.498±0.86 59.139±6.04 73.221±17.14 27.041±3.10 76.442±26.33 49.687±24.23 1.864±0.70
ENSMUST00000130157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.936±0.04
ENSMUSG00000025069 ENSMUST00000056159 0.692±0.28 N/A 1.480±0.74 0.555±0.17 0.524±0.15 0.477±0.00 0.577±0.00 0.935±0.24 0.107±0.03 0.614±0.00 0.102±0.00 0.749±0.22 0.981±1.11 82.210±25.47
ENSMUST00000120645 0.696±0.00 0.254±0.11 1.001±0.21 0.214±0.00 1.022±0.55 0.243±0.17 0.351±0.00 0.487±0.40 0.127±0.08 0.575±0.19 0.128±0.02 0.410±0.22 0.877±0.44 76.207±26.11
ENSMUST00000135016 N/A 0.101±0.00 N/A N/A 0.274±0.05 0.100±0.00 N/A N/A 0.066±0.03 N/A 0.109±0.08 0.160±0.00 N/A N/A

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