C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI5 dependent recombination repair 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025066 Sfr1 10090 + 19:47731756-47735588 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099353 Sfr1-201 47731756-47735588 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099353 39.440±18.65 44.297±4.04 31.623±2.78 50.327±16.73 46.690±13.47 27.300±3.19 26.876±10.01 26.978±10.20 21.917±8.39 28.775±11.86 17.498±6.55 56.790±25.57 49.294±27.65 26.042±5.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095H CIL_00095H_0002 VISTA 19:47608459-48210596
CIL_0006FJ CIL_0006FJ_0002 CGP 19:47646344-47735588
CIL_0006FG CIL_0006FG_0002 CGP 19:47731756-47919299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0032798 IDA Swi5-Sfr1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021974 sfr1 SWI5-dependent recombination repair 1 protein_coding Danio_rerio
ENSG00000156384 SFR1 SWI5-dependent recombination repair 1 protein_coding Homo_sapiens

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