C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139116-ENSG00000173208 CGP 9606 12:39293228-39619751
GeneTranscriptPositionBiotype
ENSG00000139116 (KIF21A)
kinesin family member 21A 		ENST00000361418 (KIF21A-003) 39294421-39442986 protein_coding
ENST00000361961 (KIF21A-001) 39293229-39443390 protein_coding
ENST00000541463 (KIF21A-008) 39294424-39442970 protein_coding
ENST00000544797 (KIF21A-002) 39294387-39443059 protein_coding
ENST00000546817 (KIF21A-011) 39333037-39337541 retained_intron
ENST00000547108 (KIF21A-006) 39319982-39340247 nonsense_mediated_decay
ENST00000547733 (KIF21A-007) 39293228-39312826 retained_intron
ENST00000547745 (KIF21A-014) 39309752-39321648 processed_transcript
ENST00000550429 (KIF21A-010) 39356600-39357287 retained_intron
ENST00000551066 (KIF21A-013) 39330052-39332327 protein_coding
ENST00000551264 (KIF21A-005) 39293231-39332408 protein_coding
ENST00000552475 (KIF21A-012) 39319990-39332024 processed_transcript
ENST00000552908 (KIF21A-009) 39357251-39367927 protein_coding
ENST00000552961 (KIF21A-004) 39293231-39341058 protein_coding
ENSG00000173208 (ABCD2)
ATP-binding cassette, sub-family D (ALD), member 2 		ENST00000308666 (ABCD2-001) 39550033-39619751 protein_coding
ENSG00000255991 (RP11-242C24.2)
 ENST00000396414 (RP11-242C24.2-001) 39466442-39467345 processed_pseudogene
ENSG00000270273 (RP11-242C24.3)
 ENST00000605387 (RP11-242C24.3-001) 39539581-39539851 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006HM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022629-ENSMUSG00000055782 CGP 10090 15:90933276-91191807
GeneTranscriptPositionBiotype
ENSMUSG00000022629 (Kif21a)
kinesin family member 21A 		ENSMUST00000067205 (Kif21a-201) 90933276-91049948 protein_coding
ENSMUST00000088614 (Kif21a-202) 90933276-91049948 protein_coding
ENSMUST00000100304 (Kif21a-203) 90933276-91049948 protein_coding
ENSMUST00000109287 (Kif21a-204) 90933276-91049948 protein_coding
ENSMUST00000109288 (Kif21a-205) 90933276-91049948 protein_coding
ENSMUSG00000055782 (Abcd2)
ATP-binding cassette, sub-family D (ALD), member 2 		ENSMUST00000069511 (Abcd2-201) 91145884-91191807 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HM_0001ENSG00000139116ENST00000361418ENST00000361961ENST00000541463ENST00000544797ENST00000546817ENST00000547108ENST00000547733ENST00000547745ENST00000550429ENST00000551066ENST00000551264ENST00000552475ENST00000552908ENST00000552961ENSG00000173208ENST00000308666ENSG00000255991ENST00000396414ENSG00000270273ENST00000605387CIL_0006HM_0002ENSMUSG00000022629ENSMUST00000067205ENSMUST00000088614ENSMUST00000100304ENSMUST00000109287ENSMUST00000109288ENSMUSG00000055782ENSMUST00000069511
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HM_0001ENSG00000139116ENST00000361418ENST00000361961ENST00000541463ENST00000544797ENST00000547108ENST00000547733ENST00000551264ENST00000552908ENST00000552961ENSG00000173208ENST00000308666ENSG00000255991ENST00000396414ENSG00000270273ENST00000605387CIL_0006HM_0002ENSMUSG00000022629ENSMUST00000067205ENSMUST00000088614ENSMUST00000100304ENSMUST00000109287ENSMUST00000109288ENSMUSG00000055782ENSMUST00000069511
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139116 ENST00000361418 N/A N/A N/A 4.816±0.00 N/A N/A 1.191±0.44 N/A N/A N/A N/A N/A N/A 1.650±1.16
ENST00000361961 N/A N/A N/A 6.234±3.30 N/A 1.184±0.00 0.650±0.00 N/A 0.682±0.00 N/A 0.385±0.00 0.292±0.00 5.338±0.00 N/A
ENST00000541463 0.591±0.00 N/A 0.906±0.00 N/A N/A 0.785±0.34 N/A 1.766±0.00 1.265±0.00 N/A N/A 0.191±0.00 N/A N/A
ENST00000544797 N/A N/A 1.457±0.00 N/A N/A N/A N/A N/A N/A 0.969±0.00 N/A 1.604±0.00 N/A N/A
ENST00000546817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547108 N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 1.040±0.00 N/A N/A N/A N/A
ENST00000547733 N/A N/A N/A N/A N/A N/A N/A 1.618±0.00 1.142±0.00 N/A N/A N/A N/A N/A
ENST00000547745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551264 N/A N/A 3.414±0.00 7.081±2.49 1.092±0.66 0.634±0.00 N/A 2.264±0.72 2.120±0.00 2.461±0.12 0.320±0.00 1.216±0.35 0.969±0.48 1.797±0.00
ENST00000552475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A
ENST00000552961 0.767±0.00 0.260±0.00 N/A 7.427±0.00 0.496±0.00 0.932±0.00 2.771±0.00 2.498±0.00 0.831±0.00 N/A 0.855±0.00 0.986±0.58 N/A N/A
ENSG00000173208 ENST00000308666 1.304±0.00 0.368±0.00 0.105±0.00 3.050±0.88 2.871±2.54 0.307±0.19 0.913±0.25 0.038±0.00 0.352±0.35 0.481±0.30 0.006±0.00 0.104±0.08 0.029±0.01 0.090±0.01
ENSG00000255991 ENST00000396414 0.041±0.00 0.088±0.00 N/A 0.088±0.04 0.046±0.00 0.280±0.00 0.040±0.00 0.022±0.00 N/A 0.022±0.00 0.076±0.00 0.027±0.00 N/A 0.020±0.00
ENSG00000270273 ENST00000605387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022629 ENSMUST00000067205 N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000088614 0.343±0.01 0.542±0.11 N/A 5.452±1.00 0.393±0.00 2.191±0.81 0.460±0.00 N/A 0.216±0.00 1.098±0.12 N/A N/A N/A N/A
ENSMUST00000100304 N/A N/A N/A N/A N/A N/A N/A N/A 1.023±0.27 0.697±0.00 N/A 1.844±0.00 N/A N/A
ENSMUST00000109287 0.445±0.00 1.823±0.00 0.540±0.00 20.531±8.52 0.387±0.03 2.202±0.00 0.492±0.08 2.580±0.87 0.573±0.30 0.866±0.06 0.473±0.10 7.292±3.69 0.772±0.37 0.599±0.11
ENSMUST00000109288 0.710±0.27 2.286±1.05 0.425±0.02 7.005±0.75 1.451±1.33 2.311±1.05 N/A 2.518±0.56 1.247±0.91 2.015±0.62 0.747±0.02 5.025±1.78 2.306±2.41 2.289±2.20
ENSMUSG00000055782 ENSMUST00000069511 30.506±11.43 2.393±0.80 1.411±0.34 3.292±1.37 21.779±4.63 0.319±0.09 0.760±0.25 0.896±0.14 7.064±5.98 3.823±0.55 7.124±0.86 3.862±2.11 0.216±0.36 0.427±0.05

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