C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family D (ALD), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308666 ABCD2-001 ENSG00000173208 9606 - 12:39550033-39619751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308666 1.304±0.00 0.368±0.00 0.105±0.00 3.050±0.88 2.871±2.54 0.307±0.19 0.913±0.25 0.038±0.00 0.352±0.35 0.481±0.30 0.006±0.00 0.104±0.08 0.029±0.01 0.090±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HM CIL_0006HM_0001 CGP 12:39293228-39619751
CIL_0006HU CIL_0006HU_0001 CGP 12:39550033-39908300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 TAS peroxisomal membrane
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006635 IGI fatty acid beta-oxidation
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0032000 IDA positive regulation of fatty acid beta-oxidation
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042760 IGI very long-chain fatty acid catabolic process
GO:0042803 IDA protein homodimerization activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069511 Abcd2-201 protein_coding Mus_musculus 0 2850

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