C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006HV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180116-ENSG00000151229 CGP 9606 12:39626167-40106089
GeneTranscriptPositionBiotype
ENSG00000151229 (SLC2A13)
solute carrier family 2 (facilitated glucose transporter), member 13
ENST00000280871 (SLC2A13-001) 39755021-40105859 protein_coding
ENST00000380858 (SLC2A13-002) 39949490-40106089 protein_coding
ENST00000465517 (SLC2A13-003) 39829408-39871881 retained_intron
ENST00000505338 (SLC2A13-004) 39830125-39835760 retained_intron
ENSG00000180116 (C12orf40)
chromosome 12 open reading frame 40
ENST00000324616 (C12orf40-003) 39626183-39721914 protein_coding
ENST00000405531 (C12orf40-002) 39626167-39692187 protein_coding
ENST00000468200 (C12orf40-001) 39626218-39908300 nonsense_mediated_decay
ENSG00000229014 (RPL30P13)
ribosomal protein L30 pseudogene 13
ENST00000418873 (RPL30P13-001) 40068243-40068590 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006HV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078932-ENSMUSG00000036298 CGP 10090 15:91199494-91573261
GeneTranscriptPositionBiotype
ENSMUSG00000036298 (Slc2a13)
solute carrier family 2 (facilitated glucose transporter), member 13
ENSMUST00000109282 (Slc2a13-003) 91542225-91573194 processed_transcript
ENSMUST00000109283 (Slc2a13-001) 91267696-91573261 protein_coding
ENSMUST00000156971 (Slc2a13-004) 91396832-91412217 processed_transcript
ENSMUSG00000078932 (CN725425)
cDNA sequence CN725425
ENSMUST00000109284 (CN725425-201) 91231578-91260885 protein_coding
ENSMUST00000190436 (CN725425-001) 91199494-91260894 protein_coding
ENSMUSG00000081771 (Gm15381)
predicted gene 15381
ENSMUST00000121501 (Gm15381-001) 91556762-91557917 processed_pseudogene
ENSMUSG00000084240 (Gm15383)
predicted gene 15383
ENSMUST00000121889 (Gm15383-001) 91530924-91532366 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HV_0001ENSG00000151229ENST00000280871ENST00000380858ENST00000465517ENST00000505338ENSG00000180116ENST00000324616ENST00000405531ENST00000468200ENSG00000229014ENST00000418873CIL_0006HV_0002ENSMUSG00000036298ENSMUST00000109282ENSMUST00000109283ENSMUST00000156971ENSMUSG00000078932ENSMUST00000109284ENSMUST00000190436ENSMUSG00000081771ENSMUST00000121501ENSMUSG00000084240ENSMUST00000121889
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HV_0001ENSG00000151229ENST00000280871ENST00000380858ENSG00000180116ENST00000324616ENSG00000229014ENST00000418873CIL_0006HV_0002ENSMUSG00000036298ENSMUST00000109282ENSMUST00000109283ENSMUSG00000078932ENSMUST00000109284ENSMUST00000190436ENSMUSG00000081771ENSMUST00000121501ENSMUSG00000084240ENSMUST00000121889
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151229 ENST00000280871 1.627±0.00 0.365±0.00 5.146±0.00 12.081±5.13 1.755±1.02 2.722±1.51 1.377±0.27 2.425±0.79 1.388±0.26 1.457±0.42 0.261±0.09 0.504±0.32 0.603±0.10 1.199±0.18
ENST00000380858 N/A N/A N/A N/A 1.391±0.00 1.414±0.00 N/A N/A 1.463±0.00 N/A N/A 0.194±0.15 N/A N/A
ENST00000465517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180116 ENST00000324616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.759±2.21
ENST00000405531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229014 ENST00000418873 N/A 0.037±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A 0.132±0.00 0.032±0.00 N/A N/A 0.067±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036298 ENSMUST00000109282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A
ENSMUST00000109283 2.993±1.12 0.252±0.08 1.372±0.05 3.172±1.80 1.378±0.44 2.435±0.44 0.210±0.06 0.977±0.12 0.124±0.04 1.246±0.24 0.070±0.02 0.610±0.21 0.203±0.14 0.077±0.06
ENSMUST00000156971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078932 ENSMUST00000109284 0.022±0.00 0.093±0.00 N/A 0.026±0.02 0.231±0.02 0.259±0.10 0.259±0.05 0.057±0.02 0.017±0.01 0.208±0.03 0.035±0.02 0.117±0.09 0.244±0.06 N/A
ENSMUST00000190436 N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 0.348±0.12 0.601±0.16
ENSMUSG00000081771 ENSMUST00000121501 0.193±0.00 N/A 0.006±0.00 0.062±0.01 0.202±0.08 0.172±0.00 0.083±0.00 N/A 0.008±0.00 0.098±0.00 N/A 0.021±0.00 0.005±0.00 N/A
ENSMUSG00000084240 ENSMUST00000121889 0.046±0.04 N/A 0.031±0.02 0.080±0.01 0.050±0.01 0.071±0.03 N/A 0.039±0.01 0.008±0.00 0.043±0.02 N/A 0.107±0.00 0.003±0.00 0.038±0.02

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